D12: DODECANE
D12 is a Ligand Of Interest in 5NC5 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5NC5_D12_C_1107 | 52% | 67% | 0.13 | 0.887 | 0.86 | 0.29 | - | - | 0 | 0 | 100% | 1 |
| 5NC5_D12_A_1103 | 33% | 65% | 0.165 | 0.846 | 0.53 | 0.67 | - | - | 1 | 0 | 100% | 1 |
| 5NC5_D12_C_1106 | 31% | 67% | 0.213 | 0.89 | 0.41 | 0.7 | - | - | 0 | 0 | 100% | 1 |
| 5NC5_D12_B_1121 | 19% | 67% | 0.221 | 0.838 | 0.75 | 0.37 | - | - | 1 | 0 | 92% | 1 |
| 5NC5_D12_A_1112 | 17% | 68% | 0.213 | 0.8 | 0.66 | 0.44 | - | - | 0 | 0 | 100% | 1 |
| 5NC5_D12_C_1103 | 8% | 61% | 0.238 | 0.728 | 0.65 | 0.68 | - | - | 0 | 0 | 100% | 1 |
| 5NC5_D12_B_1104 | 5% | 71% | 0.203 | 0.657 | 0.53 | 0.44 | - | - | 0 | 0 | 75% | 1 |
| 5NC5_D12_C_1108 | 3% | 70% | 0.292 | 0.738 | 0.55 | 0.47 | - | - | 0 | 0 | 42% | 1 |
| 6ZOC_D12_A_1210 | 93% | 78% | 0.063 | 0.965 | 0.24 | 0.55 | - | - | 1 | 0 | 100% | 1 |
| 6ZOD_D12_C_1308 | 34% | 74% | 0.144 | 0.829 | 0.23 | 0.64 | - | - | 0 | 0 | 100% | 1 |
| 5JMN_D12_C_1112 | 31% | 83% | 0.213 | 0.889 | 0.29 | 0.42 | - | - | 0 | 0 | 100% | 1 |
| 6ZO8_D12_B_1114 | 30% | 81% | 0.206 | 0.875 | 0.27 | 0.48 | - | - | 0 | 0 | 100% | 1 |
| 9HAO_D12_A_1118 | 24% | 95% | 0.199 | 0.836 | 0.29 | 0.11 | - | - | 0 | 0 | 100% | 1 |
| 2XE5_D12_E_1346 | 99% | 82% | 0.038 | 0.984 | 0.4 | 0.34 | - | - | 1 | 0 | 100% | 1 |
| 7PGB_D12_o_303 | 99% | 67% | 0.046 | 0.987 | 0.31 | 0.77 | - | - | 2 | 0 | 100% | 1 |
| 3UTY_D12_A_501 | 98% | 63% | 0.058 | 0.988 | 0.22 | 1.03 | - | 1 | 0 | 0 | 100% | 1 |
| 6LPJ_D12_A_2406 | 97% | 75% | 0.057 | 0.979 | 0.29 | 0.58 | - | - | 0 | 0 | 100% | 1 |
| 3UTX_D12_B_401 | 93% | 11% | 0.076 | 0.977 | 1.73 | 2.32 | 2 | 5 | 0 | 0 | 100% | 1 |














