GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5M6X designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5M6X_GDP_B_202 | 100% | 25% | 0.02 | 0.997 | 1.17 | 1.74 | 3 | 6 | 0 | 0 | 100% | 1 |
| 5M6X_GDP_I_202 | 100% | 25% | 0.022 | 0.996 | 1.2 | 1.74 | 4 | 6 | 0 | 0 | 100% | 1 |
| 1OW3_GDP_B_680 | 99% | 32% | 0.039 | 0.986 | 0.94 | 1.65 | 1 | 8 | 0 | 0 | 100% | 1 |
| 6R3V_GDP_B_202 | 98% | 20% | 0.05 | 0.982 | 1.55 | 1.73 | 4 | 7 | 0 | 0 | 100% | 1 |
| 7QTM_GDP_I_201 | 92% | 23% | 0.069 | 0.966 | 1.36 | 1.68 | 4 | 9 | 0 | 0 | 100% | 1 |
| 7QSC_GDP_B_201 | 83% | 24% | 0.078 | 0.939 | 1.32 | 1.69 | 4 | 9 | 0 | 0 | 100% | 1 |
| 5M70_GDP_G_202 | 82% | 25% | 0.08 | 0.938 | 1.21 | 1.73 | 4 | 7 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
