Ligand validation:5LDU

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5LDU designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5LDU_NAG_A_509	76%	15%	0.119	0.957	1.31	2.58	1	8	0	0	100%	0.9333
5LDU_NAG_A_508	29%	34%	0.264	0.923	0.71	1.99	-	7	0	0	100%	0.9333
5LDU_NAG_A_515	8%	35%	0.307	0.786	1.06	1.61	1	5	0	0	100%	0.9333
3FPX_NAG_A_1509	39%	36%	0.207	0.916	0.74	1.84	1	3	0	0	100%	0.9333
3V9C_NAG_A_1509	39%	56%	0.182	0.888	0.52	1.17	-	1	0	0	100%	0.9333
3PXL_NAG_A_1509	33%	39%	0.186	0.864	0.63	1.82	-	6	0	0	100%	0.9333
3DIV_NAG_A_514	25%	57%	0.175	0.818	0.54	1.07	-	1	6	0	93%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.