GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5KSY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5KSY_GDP_A_701 | 36% | 25% | 0.148 | 0.841 | 1.17 | 1.77 | 3 | 7 | 0 | 0 | 100% | 0.5 |
| 5KSO_GDP_A_701 | 92% | 48% | 0.066 | 0.964 | 1.19 | 0.74 | 3 | - | 0 | 0 | 100% | 1 |
| 5KTY_GDP_A_701 | 88% | 46% | 0.077 | 0.959 | 1.2 | 0.8 | 3 | - | 1 | 0 | 100% | 1 |
| 5KSP_GDP_A_701 | 76% | 25% | 0.086 | 0.926 | 1.15 | 1.76 | 2 | 6 | 0 | 0 | 100% | 1 |
| 5KU1_GDP_A_701 | 75% | 25% | 0.092 | 0.928 | 1.16 | 1.75 | 2 | 7 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
