Ligand validation:5IJD

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5IJD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5IJD_NAG_D_803	25%	15%	0.207	0.843	0.96	2.96	-	8	0	0	100%	0.9333
5IJD_NAG_A_704	18%	32%	0.271	0.857	0.71	2.1	-	6	2	0	100%	0.9333
5IJD_NAG_B_705	15%	17%	0.204	0.761	1.3	2.44	3	4	1	1	100%	0.9333
5IJD_NAG_C_201	12%	43%	0.341	0.869	0.65	1.6	-	4	0	0	100%	0.9333
5IJD_NAG_A_703	7%	30%	0.276	0.734	0.59	2.31	-	6	1	0	100%	0.9333
3VQ2_NAG_A_800	48%	11%	0.168	0.911	1.87	2.43	1	4	0	0	100%	0.9333
5IJB_NAG_C_201	45%	43%	0.129	0.859	0.54	1.69	-	2	0	0	100%	0.9333
3VQ1_NAG_B_802	30%	61%	0.27	0.934	0.5	0.98	-	1	1	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.