8GD: 2'-deoxy-8-oxoguanosine 5'-(trihydrogen diphosphate)
8GD is a Ligand Of Interest in 5GGB designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 5GGB_8GD_A_401 | 96% | 6% | 0.062 | 0.983 | 2.57 | 2.4 | 10 | 5 | 1 | 0 | 100% | 1 |
| 6M72_8GD_A_401 | 86% | 55% | 0.074 | 0.948 | 0.89 | 0.7 | 1 | - | 0 | 0 | 100% | 1 |
| 3AC9_8GD_B_1 | 19% | 32% | 0.138 | 0.731 | 1.31 | 1.3 | 2 | 6 | 4 | 0 | 100% | 1 |