PDA: 2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID

PDA is a Ligand Of Interest in 5G2Q designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5G2Q_PDA_A_1000 94% 18% 0.07 0.9782.31 1.14 2 220100%1
5G2Q_PDA_G_1000 93% 17% 0.073 0.9742.23 1.34 3 400100%1
5G2Q_PDA_B_1000 90% 15% 0.084 0.9742.18 1.55 3 630100%1
5G2Q_PDA_H_1000 89% 11% 0.083 0.9682.52 1.55 2 300100%1
5G2Q_PDA_D_1000 88% 14% 0.086 0.9692.17 1.59 3 620100%1
5G2Q_PDA_C_1000 88% 15% 0.085 0.9662.34 1.38 3 330100%1
5G2Q_PDA_E_1000 83% 14% 0.094 0.9572.43 1.38 2 200100%1
5G2Q_PDA_I_1000 83% 14% 0.096 0.9592.36 1.48 2 720100%1
5G2Q_PDA_F_1000 81% 14% 0.099 0.9552.54 1.28 2 240100%1
5G2Q_PDA_L_1000 72% 11% 0.113 0.9412.57 1.55 3 420100%1
5G2Q_PDA_K_1000 72% 16% 0.115 0.9432.26 1.36 2 310100%1
5G2Q_PDA_J_1000 64% 19% 0.122 0.9242.26 1.12 2 110100%1
8H21_PDA_A_407 98% 12% 0.051 0.982.18 1.77 3 310100%1
2Q3D_PDA_A_311 95% 19% 0.063 0.9741.77 1.62 3 321100%1
5WT6_PDA_A_503 95% 23% 0.069 0.981.76 1.33 6 320100%1
6KG1_PDA_A_503 81% 2% 0.094 0.9523.58 2.96 7 980100%1
5XT6_PDA_B_501 75% 9% 0.084 0.9193.07 1.34 3 520100%1