Ligand validation:5F87

UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 5F87 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5F87_UDP_F_501	61%	48%	0.197	0.987	0.89	1.13	1	2	0	0	100%	1
5F87_UDP_B_501	61%	52%	0.199	0.989	0.83	1.02	1	3	1	0	100%	1
5F87_UDP_D_501	56%	53%	0.206	0.98	0.82	0.98	1	1	1	0	100%	1
5F87_UDP_C_501	56%	52%	0.202	0.975	0.85	1.02	2	2	0	0	100%	1
5F87_UDP_E_501	54%	52%	0.213	0.98	0.88	0.99	2	2	1	0	100%	1
5F87_UDP_A_501	53%	49%	0.225	0.988	0.82	1.13	1	2	2	0	100%	1
5F84_UDP_A_501	82%	55%	0.124	0.981	0.89	0.83	1	1	0	0	100%	1
4PHR_UDP_A_301	100%	43%	0.042	0.989	0.84	1.41	-	4	0	0	100%	1
2B69_UDP_A_900	100%	47%	0.046	0.992	1.19	0.9	2	1	0	0	100%	1
1GX4_UDP_A_401	100%	34%	0.046	0.991	1.68	1.03	2	3	0	0	100%	1
5GY7_UDP_B_401	99%	45%	0.047	0.987	0.98	1.18	1	5	0	0	100%	1
3U2V_UDP_B_270	99%	35%	0.049	0.989	1.12	1.52	2	6	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.