Ligand validation:5EBB

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5EBB designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5EBB_NAG_A_705	51%	4%	0.171	0.926	2.25	3.63	3	10	0	0	100%	0.9333
5EBB_NAG_C_705	38%	10%	0.183	0.885	2.42	2.14	4	6	0	0	100%	0.9333
5EBB_NAG_A_704	36%	26%	0.2	0.894	1.75	1.4	3	2	0	0	100%	0.9333
5EBB_NAG_B_705	33%	8%	0.188	0.868	2.36	2.39	4	8	0	0	100%	0.9333
5EBB_NAG_A_703	24%	18%	0.256	0.887	1.92	1.82	5	5	0	0	100%	0.9333
5EBB_NAG_B_704	20%	17%	0.227	0.832	1.73	2.03	3	3	0	0	100%	0.9333
5EBB_NAG_C_703	11%	14%	0.284	0.796	1.97	2.03	4	5	0	0	100%	0.9333
5EBB_NAG_B_703	7%	16%	0.333	0.788	2.43	1.49	5	3	0	0	100%	0.9333
5EBB_NAG_C_704	2%	1%	0.32	0.62	5.63	3.76	6	10	1	1	100%	0.9333
5EBE_NAG_A_602	64%	12%	0.132	0.931	2.05	2.18	3	2	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.