5DK: (E)-N~2~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-D-arginine
5DK is a Ligand Of Interest in 5DJ3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5DJ3_5DK_B_401 | 85% | 14% | 0.098 | 0.97 | 2.06 | 1.73 | 3 | 9 | 4 | 0 | 100% | 1 |
| 5DJ3_5DK_D_500 | 53% | 11% | 0.184 | 0.948 | 1.93 | 2.1 | 3 | 8 | 7 | 0 | 100% | 1 |
| 5DJ3_5DK_A_500 | 42% | 11% | 0.199 | 0.924 | 2.1 | 1.96 | 4 | 9 | 7 | 0 | 100% | 1 |
| 5DJ3_5DK_C_500 | 35% | 11% | 0.221 | 0.916 | 2.3 | 1.86 | 8 | 5 | 3 | 0 | 100% | 1 |
| 8D5D_5DK_B_505 | 96% | 22% | 0.057 | 0.972 | 1.32 | 1.83 | 3 | 5 | 0 | 0 | 100% | 1 |
