5DK: (E)-N~2~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-D-arginine
5DK is a Ligand Of Interest in 5DJ3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5DJ3_5DK_B_401 | 51% | 18% | 0.214 | 0.971 | 2.04 | 1.64 | 3 | 8 | 4 | 0 | 100% | 1 |
| 5DJ3_5DK_A_500 | 29% | 14% | 0.286 | 0.946 | 2.08 | 1.98 | 4 | 8 | 4 | 0 | 100% | 1 |
| 5DJ3_5DK_D_500 | 21% | 15% | 0.342 | 0.952 | 1.9 | 2.08 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5DJ3_5DK_C_500 | 9% | 13% | 0.367 | 0.866 | 2.26 | 1.89 | 8 | 5 | 1 | 0 | 100% | 1 |
| 8D5D_5DK_B_505 | 95% | 25% | 0.071 | 0.975 | 1.31 | 1.86 | 3 | 6 | 0 | 0 | 100% | 1 |
