5C1D | pdb_00005c1d


12V: (2S,3R,4R,5S,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-thiopyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate

12V is a Ligand Of Interest in 5C1D designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5C1D_12V_A_1101 80% 13% 0.103 0.9571.87 1.98 9 8110100%1
4AY6_12V_D_1200 100% 26% 0.021 0.9981.16 1.71 3 1020100%1
4GYY_12V_C_1501 97% 11% 0.053 0.9771.79 2.32 8 1410100%1
5BNW_12V_A_1101 97% 14% 0.054 0.9772.1 1.7 7 930100%1
4XIF_12V_B_1102 96% 23% 0.06 0.9771.3 1.78 4 1100100%1
4N3B_12V_A_1501 95% 9% 0.064 0.9782 2.37 5 1320100%1
4XI9_12V_C_1200 95% 22% 0.073 0.9831.24 1.88 4 1300100%0.82