TYD: THYMIDINE-5'-DIPHOSPHATE
TYD is a Ligand Of Interest in 4ZYJ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4ZYJ_TYD_B_501 | 58% | 31% | 0.151 | 0.932 | 1.02 | 1.59 | 1 | 1 | 0 | 0 | 100% | 1 |
| 4ZYJ_TYD_A_501 | 51% | 20% | 0.181 | 0.937 | 1.1 | 2.15 | 2 | 4 | 2 | 0 | 100% | 1 |
| 4ZYJ_TYD_C_501 | 49% | 30% | 0.164 | 0.914 | 1.06 | 1.63 | 1 | 1 | 2 | 0 | 100% | 1 |
| 4ZYJ_TYD_D_501 | 41% | 29% | 0.195 | 0.914 | 1.15 | 1.59 | 1 | 3 | 1 | 0 | 100% | 1 |
| 3OTI_TYD_B_377 | 98% | 21% | 0.054 | 0.987 | 1.12 | 2.08 | 1 | 2 | 0 | 0 | 100% | 1 |
| 3EVO_TYD_A_160 | 98% | 30% | 0.057 | 0.988 | 1 | 1.68 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5WXK_TYD_A_401 | 97% | 31% | 0.06 | 0.987 | 0.99 | 1.64 | 1 | 2 | 0 | 0 | 100% | 1 |
| 3EM1_TYD_B_143 | 97% | 29% | 0.059 | 0.984 | 1.01 | 1.71 | 1 | 3 | 0 | 0 | 100% | 1 |
| 3RSC_TYD_A_397 | 97% | 37% | 0.055 | 0.977 | 0.74 | 1.61 | 1 | 3 | 0 | 0 | 100% | 1 |
