Ligand validation:4YFD

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 4YFD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4YFD_NAG_A_602	37%	75%	0.144	0.84	0.34	0.63	-	1	0	0	100%	0.9333
4YFD_NAG_B_404	33%	47%	0.186	0.863	1.23	0.85	1	1	0	0	100%	0.9333
4YFD_NAG_B_405	30%	56%	0.207	0.87	1.09	0.58	2	-	0	0	100%	0.9333
4YFD_NAG_B_401	26%	70%	0.2	0.838	0.4	0.74	-	1	0	0	100%	0.9333
4YFD_NAG_B_402	25%	47%	0.193	0.826	0.96	1.12	1	1	0	0	100%	0.9333
4YFD_NAG_B_403	19%	69%	0.239	0.835	0.56	0.63	-	-	0	0	100%	0.9333
4YFD_NAG_A_601	9%	87%	0.286	0.782	0.28	0.42	-	-	0	0	100%	0.9333
5XWT_NAG_B_602	24%	35%	0.209	0.84	1.56	1.12	3	2	0	0	100%	0.9333
4Y61_NAG_B_301	21%	77%	0.276	0.888	0.3	0.59	-	1	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.