GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4V5F designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4V5F_GDP_AY_703 | 89% | 28% | 0.069 | 0.952 | 1.06 | 1.72 | 1 | 9 | 8 | 0 | 100% | 1 |
| 4V5F_GDP_CY_703 | 77% | 25% | 0.086 | 0.929 | 1.08 | 1.86 | 1 | 10 | 8 | 0 | 100% | 1 |
| 4W29_GDP_CY_701 | 100% | 22% | 0.022 | 0.992 | 1.14 | 1.98 | 3 | 12 | 14 | 0 | 100% | 1 |
| 4V9M_GDP_CY_702 | 100% | 28% | 0.028 | 0.993 | 1.05 | 1.71 | 1 | 9 | 5 | 0 | 100% | 1 |
| 4V9L_GDP_AY_702 | 99% | 28% | 0.044 | 0.984 | 1.06 | 1.71 | 1 | 9 | 12 | 0 | 100% | 1 |
| 1FNM_GDP_A_900 | 96% | 46% | 0.059 | 0.974 | 1.24 | 0.76 | 2 | 1 | 1 | 0 | 100% | 1 |
| 4WQF_GDP_BZ_704 | 94% | 21% | 0.06 | 0.966 | 1.26 | 1.89 | 5 | 11 | 5 | 0 | 100% | 0.98 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
