API: 2,6-DIAMINOPIMELIC ACID
API is a Ligand Of Interest in 4G88 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 4G88_API_A_401 | 91% | 31% | 0.067 | 0.96 | 1.45 | 1.22 | 2 | 2 | 0 | 0 | 100% | 1 |
| 4G88_API_G_401 | 90% | 53% | 0.068 | 0.958 | 0.6 | 1.08 | - | 1 | 0 | 0 | 100% | 1 |
| 4G88_API_H_401 | 82% | 35% | 0.085 | 0.944 | 1.43 | 1.06 | 2 | 1 | 0 | 0 | 100% | 1 |
| 4G88_API_F_401 | 76% | 50% | 0.099 | 0.937 | 0.66 | 1.15 | - | 1 | 0 | 0 | 100% | 1 |
| 4G88_API_E_401 | 75% | 33% | 0.093 | 0.927 | 1.35 | 1.23 | 2 | 2 | 0 | 0 | 100% | 1 |
| 4G88_API_B_401 | 72% | 26% | 0.097 | 0.921 | 1.89 | 1.04 | 4 | 1 | 0 | 0 | 100% | 1 |
| 4G88_API_D_401 | 57% | 26% | 0.117 | 0.89 | 1.85 | 1.08 | 4 | 1 | 1 | 0 | 100% | 1 |
| 4G88_API_C_401 | 21% | 34% | 0.174 | 0.786 | 1.33 | 1.19 | 2 | - | 4 | 0 | 100% | 1 |
| 3TD4_API_A_401 | 82% | 41% | 0.096 | 0.956 | 1.27 | 0.94 | 1 | - | 0 | 0 | 100% | 1 |
| 2DAP_API_A_902 | 99% | 5% | 0.042 | 0.979 | 2.26 | 3 | 6 | 5 | 1 | 0 | 100% | 1 |
| 5M47_API_A_301 | 93% | 39% | 0.069 | 0.969 | 1.04 | 1.24 | 1 | 2 | 1 | 0 | 100% | 1 |
| 4WCK_API_A_533 | 89% | 49% | 0.068 | 0.953 | 1 | 0.88 | - | - | 0 | 0 | 100% | 1 |
| 8G6P_API_A_809 | 89% | 48% | 0.069 | 0.953 | 0.98 | 0.93 | - | - | 0 | 0 | 100% | 1 |
| 5LKW_API_B_201 | 83% | 35% | 0.063 | 0.983 | 0.86 | 1.57 | - | 2 | 0 | 0 | 69% | 1 |