4EDF | pdb_00004edf


UPG: URIDINE-5'-DIPHOSPHATE-GLUCOSE

UPG is a Ligand Of Interest in 4EDF designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4EDF_UPG_B_501 84% 39% 0.101 0.9680.9 1.37 2 500100%1
4EDF_UPG_A_501 80% 38% 0.117 0.9720.98 1.34 2 600100%1
4EDF_UPG_C_501 79% 40% 0.118 0.9710.94 1.29 2 500100%1
4EDF_UPG_D_501 77% 40% 0.124 0.9680.92 1.28 2 500100%1
2Q3E_UPG_A_501 97% 39% 0.054 0.9791.04 1.24 1 920100%1
6C5Z_UPG_F_501 95% 33% 0.059 0.9711.2 1.35 2 620100%1
3KHU_UPG_E_502 84% 31% 0.096 0.9641.15 1.5 4 900100%1
6C5A_UPG_F_502 77% 32% 0.133 0.981.19 1.4 3 620100%1
6C4J_UPG_A_502 75% 32% 0.142 0.9811.22 1.37 2 510100%1
9YFK_UPG_B_401 100% 38% 0.027 0.9941.27 1.07 3 300100%1
8VRF_UPG_A_506 99% 56% 0.04 0.9850.7 0.84 - -00100%1
3JSZ_UPG_A_526 99% 37% 0.042 0.9830.94 1.41 1 500100%1
3SRZ_UPG_A_556 98% 32% 0.049 0.981.04 1.54 3 830100%1
8UAG_UPG_A_504 98% 5% 0.049 0.9783.87 1.44 16 500100%1