Ligand validation:4DCT

GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 4DCT designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4DCT_GDP_A_501	71%	42%	0.115	0.936	0.92	1.35	-	6	2	0	100%	1
4DCT_GDP_A_502	8%	42%	0.395	0.88	0.93	1.35	1	4	8	0	100%	0.5
4DCS_GDP_A_501	86%	46%	0.09	0.96	0.99	1.1	2	3	0	0	100%	1
4DCU_GDP_A_501	84%	46%	0.111	0.975	0.94	1.17	1	3	0	0	100%	1
2HJG_GDP_A_500	72%	28%	0.126	0.952	1.15	1.89	2	6	1	0	100%	1
5MBS_GDP_A_501	45%	27%	0.206	0.938	1.19	1.88	2	8	0	0	100%	0.8036
1RRG_GDP_A_183	100%	19%	0.036	0.997	2.05	1.56	7	3	0	0	100%	1
5YMX_GDP_A_301	100%	54%	0.038	0.994	0.92	0.85	1	-	2	0	100%	1
8CNJ_GDP_B_201	100%	56%	0.04	0.992	0.91	0.77	1	-	0	0	100%	1
5UQW_GDP_A_1002	100%	47%	0.04	0.99	1.04	1.01	2	2	0	0	100%	1
2PHN_GDP_A_2696	100%	45%	0.046	0.99	1.08	1.08	1	2	0	0	100%	1

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.