PMP: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
PMP is a Ligand Of Interest in 4D9B designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4D9B_PMP_B_401 | 95% | 8% | 0.078 | 0.982 | 2.12 | 2.71 | 5 | 9 | 0 | 0 | 100% | 1 |
| 4D9B_PMP_A_402 | 95% | 25% | 0.082 | 0.984 | 0.96 | 2.22 | 1 | 5 | 0 | 0 | 100% | 1 |
| 4D9B_PMP_D_402 | 93% | 42% | 0.092 | 0.989 | 1.1 | 1.22 | 1 | 2 | 0 | 0 | 100% | 1 |
| 4D9B_PMP_C_402 | 88% | 7% | 0.096 | 0.973 | 1.98 | 3.03 | 4 | 8 | 0 | 0 | 100% | 1 |
| 4D9C_PMP_D_402 | 92% | 40% | 0.088 | 0.979 | 1.15 | 1.25 | 1 | 4 | 1 | 0 | 100% | 1 |
| 2QB3_PMP_A_700 | 99% | 26% | 0.05 | 0.985 | 2.08 | 1.08 | 4 | 1 | 0 | 0 | 100% | 0.4 |
| 8TN3_PMP_B_501 | 99% | 52% | 0.058 | 0.99 | 0.87 | 0.99 | - | 1 | 0 | 0 | 100% | 1 |
| 6HBV_PMP_A_502 | 99% | 18% | 0.061 | 0.992 | 2.55 | 1.19 | 3 | 2 | 0 | 0 | 100% | 0.5 |
| 2QBT_PMP_A_700 | 99% | 49% | 0.062 | 0.99 | 0.88 | 1.09 | 1 | 1 | 0 | 0 | 100% | 0.75 |
| 6Q8E_PMP_A_401 | 98% | 49% | 0.058 | 0.984 | 0.86 | 1.12 | - | 1 | 0 | 0 | 100% | 1 |
