Ligand validation:3VD9

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
3VD9_IPT_B_2001	75%	55%	0.076	0.959	0.71	0.85	-	-	0	100%	1
3VD9_IPT_A_2001	75%	60%	0.076	0.958	0.66	0.71	-	-	0	100%	0.95
3VD9_IPT_C_2001	73%	57%	0.082	0.96	0.65	0.81	-	-	0	100%	1
3VD9_IPT_D_2001	70%	56%	0.084	0.952	0.68	0.81	-	-	0	100%	0.96
1JYX_IPT_B_2001	93%	45%	0.047	0.984	0.46	1.54	-	2	0	100%	1
1PX4_IPT_D_2001	90%	32%	0.053	0.98	0.82	1.83	-	7	1	100%	1
3DYO_IPT_C_2001	89%	49%	0.054	0.978	0.68	1.18	-	2	0	100%	1
3VD4_IPT_B_2001	79%	57%	0.069	0.963	0.73	0.73	-	-	0	100%	1
3VDC_IPT_D_2001	79%	56%	0.074	0.971	0.66	0.84	-	-	0	100%	0.96
4OUE_IPT_B_501	91%	43%	0.05	0.981	1.4	0.74	2	-	1	100%	1
2P9H_IPT_A_998	90%	37%	0.049	0.977	1.37	1.05	1	1	0	100%	1
3OGS_IPT_A_1024	83%	25%	0.062	0.968	1.27	1.78	1	5	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

3VD9 | pdb_00003vd9