UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3RMV designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 3RMV_UDP_A_264 | 89% | 30% | 0.076 | 0.96 | 1.07 | 1.62 | 2 | 6 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 31% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
| 3U2U_UDP_B_268 | 98% | 32% | 0.053 | 0.986 | 1.05 | 1.53 | - | 7 | 0 | 0 | 100% | 1 |
| 3U2W_UDP_A_264 | 96% | 41% | 0.062 | 0.977 | 0.73 | 1.44 | - | 4 | 2 | 0 | 100% | 1 |
| 3T7M_UDP_B_264 | 91% | 36% | 0.082 | 0.975 | 0.94 | 1.47 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EQL_UDP_B_301 | 90% | 65% | 0.071 | 0.958 | 0.38 | 0.78 | - | 2 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.3 | 2.73 | 13 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_B_704 | 100% | 57% | 0.03 | 0.994 | 0.59 | 0.91 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 40% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 99% | 34% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |