DTP: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE
DTP is a Ligand Of Interest in 3PKP designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3PKP_DTP_I_500 | 78% | 31% | 0.134 | 0.977 | 1.05 | 1.81 | 2 | 6 | 0 | 0 | 100% | 1 |
3PKP_DTP_D_500 | 75% | 36% | 0.142 | 0.978 | 0.96 | 1.63 | 1 | 7 | 0 | 0 | 100% | 1 |
3PKP_DTP_J_500 | 70% | 10% | 0.151 | 0.971 | 1.02 | 3.47 | 1 | 9 | 0 | 0 | 100% | 1 |
3PKP_DTP_C_500 | 70% | 9% | 0.141 | 0.96 | 1.02 | 3.51 | 2 | 9 | 0 | 0 | 100% | 1 |
3PKP_DTP_A_500 | 69% | 37% | 0.151 | 0.968 | 0.95 | 1.59 | 1 | 6 | 0 | 0 | 100% | 1 |
3PKP_DTP_B_500 | 64% | 34% | 0.155 | 0.955 | 1.09 | 1.59 | 3 | 7 | 0 | 0 | 100% | 1 |
3PKP_DTP_L_500 | 44% | 33% | 0.185 | 0.914 | 1.06 | 1.69 | 1 | 6 | 0 | 0 | 100% | 1 |
3PKP_DTP_K_500 | 32% | 13% | 0.235 | 0.911 | 1.03 | 3.05 | 2 | 7 | 0 | 0 | 100% | 0.8 |
5KFU_DTP_A_506 | 100% | 37% | 0.044 | 0.985 | 1.26 | 1.31 | 4 | 3 | 0 | 0 | 100% | 1 |
5KG6_DTP_A_506 | 99% | 35% | 0.046 | 0.984 | 1.32 | 1.34 | 5 | 3 | 0 | 0 | 100% | 0.9 |
4ED1_DTP_P_502 | 99% | 49% | 0.05 | 0.987 | 0.7 | 1.27 | - | 3 | 0 | 0 | 100% | 1 |
4ED0_DTP_P_502 | 99% | 46% | 0.051 | 0.987 | 0.75 | 1.35 | - | 1 | 0 | 0 | 100% | 1 |
5KG2_DTP_A_506 | 99% | 33% | 0.05 | 0.986 | 1.37 | 1.41 | 5 | 3 | 0 | 0 | 100% | 0.75 |