Ligand validation:3LW5

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 3LW5 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3LW5_CLA_B_1203	38%	6%	0.142	0.892	2.18	2.87	16	32	24	2	100%	1
3LW5_CLA_A_1131	35%	7%	0.139	0.874	2.2	2.6	16	23	38	2	100%	1
3LW5_CLA_A_9022	35%	7%	0.149	0.889	2.16	2.63	15	28	40	2	100%	1
3LW5_CLA_B_1227	32%	5%	0.129	0.896	2.56	2.75	15	25	13	1	77%	1
3LW5_CLA_B_9010	31%	7%	0.164	0.896	2.12	2.62	16	33	16	2	100%	1
3LW5_CLA_B_1220	30%	5%	0.143	0.852	2.47	2.76	22	30	69	1	100%	1
3LW5_CLA_A_1128	29%	7%	0.156	0.87	2.16	2.55	15	26	21	2	100%	1
3LW5_CLA_A_9012	28%	7%	0.161	0.875	2.21	2.58	17	25	44	2	100%	1
3LW5_CLA_B_1238	28%	7%	0.156	0.865	2.16	2.67	14	29	18	2	100%	1
3LW5_CLA_B_1224	28%	6%	0.162	0.874	2.27	2.76	15	23	17	2	100%	1
3LW5_CLA_A_1136	28%	7%	0.158	0.867	2.16	2.6	16	25	29	2	100%	1
3LW5_CLA_A_9011	28%	7%	0.187	0.915	2.15	2.67	17	27	15	2	100%	1
3LW5_CLA_A_9023	28%	7%	0.172	0.888	2.22	2.57	14	28	64	2	100%	1
3LW5_CLA_A_1104	27%	5%	0.139	0.858	2.28	2.88	14	29	18	2	88%	1
3LW5_CLA_B_1219	26%	5%	0.131	0.847	2.47	2.7	16	21	16	2	85%	1
3LW5_CLA_A_1127	25%	6%	0.153	0.876	2.3	2.73	16	25	18	2	85%	1
3LW5_CLA_A_1122	25%	6%	0.152	0.873	2.38	2.75	15	24	24	2	85%	1
3LW5_CLA_A_1137	24%	4%	0.144	0.886	2.51	2.96	16	25	11	1	72%	1
3LW5_CLA_B_1239	24%	7%	0.171	0.864	2.1	2.69	15	27	23	2	100%	1
3LW5_CLA_B_1210	23%	8%	0.166	0.852	2.2	2.46	16	24	21	2	100%	1
3LW5_CLA_B_1205	23%	7%	0.184	0.882	2.18	2.7	13	25	36	2	100%	1
3LW5_CLA_B_1215	23%	6%	0.17	0.874	2.21	2.69	14	29	14	2	92%	1
3LW5_CLA_A_9013	23%	6%	0.168	0.852	2.28	2.71	16	28	36	2	100%	1
3LW5_CLA_A_1106	22%	7%	0.179	0.869	2.16	2.62	16	28	29	2	100%	1
3LW5_CLA_A_1126	22%	7%	0.172	0.854	2.15	2.59	15	28	49	2	100%	1
3LW5_CLA_B_1221	22%	5%	0.168	0.887	2.41	2.77	19	26	25	1	83%	1
3LW5_CLA_B_1226	21%	7%	0.181	0.863	2.15	2.72	16	27	25	2	100%	1
3LW5_CLA_B_1235	21%	8%	0.18	0.859	2.1	2.48	14	23	66	2	100%	1
3LW5_CLA_A_1129	20%	4%	0.14	0.845	2.46	2.98	14	25	6	1	77%	1
3LW5_CLA_A_1140	20%	8%	0.167	0.836	2.15	2.51	16	26	49	2	100%	1
3LW5_CLA_B_1214	20%	7%	0.156	0.839	2.3	2.51	14	22	24	2	91%	1
3LW5_CLA_4_4002	20%	3%	0.126	0.812	2.7	3.28	23	34	33	2	80%	1
3LW5_CLA_A_1237	20%	7%	0.176	0.847	2.12	2.73	15	28	32	2	100%	1
3LW5_CLA_B_1206	20%	8%	0.17	0.835	2.13	2.45	15	22	19	2	100%	1
3LW5_CLA_A_1125	19%	8%	0.159	0.816	2.18	2.43	16	23	74	2	100%	1
3LW5_CLA_A_1120	19%	5%	0.128	0.813	2.48	2.91	15	24	12	1	78%	1
3LW5_CLA_A_1133	19%	5%	0.142	0.839	2.46	2.85	15	25	38	1	77%	1
3LW5_CLA_J_1308	19%	5%	0.123	0.789	2.4	2.96	19	27	56	2	85%	1
3LW5_CLA_B_1202	17%	6%	0.182	0.839	2.17	2.91	15	30	33	2	100%	1
3LW5_CLA_A_1139	17%	5%	0.17	0.869	2.45	2.91	16	25	36	1	78%	1
3LW5_CLA_B_1217	17%	5%	0.159	0.853	2.38	2.95	14	26	12	1	77%	1
3LW5_CLA_B_1225	17%	7%	0.196	0.861	2.11	2.73	14	28	31	2	100%	1
3LW5_CLA_B_1229	16%	6%	0.177	0.821	2.23	2.83	16	25	22	2	100%	1
3LW5_CLA_A_1132	16%	6%	0.186	0.835	2.2	2.82	14	29	20	2	100%	1
3LW5_CLA_B_1216	16%	6%	0.17	0.821	2.18	2.73	16	25	16	2	94%	1
3LW5_CLA_L_1501	15%	5%	0.143	0.811	2.47	2.83	15	25	19	1	77%	1
3LW5_CLA_A_1124	15%	8%	0.178	0.81	2.14	2.55	15	26	70	2	100%	1
3LW5_CLA_I_1204	15%	6%	0.161	0.799	2.26	2.73	15	22	6	2	92%	1
3LW5_CLA_2_4009	14%	6%	0.152	0.765	2.19	2.71	14	26	11	2	100%	1
3LW5_CLA_A_1110	14%	6%	0.144	0.789	2.37	2.6	15	24	2	1	83%	1
3LW5_CLA_A_1107	14%	6%	0.179	0.843	2.3	2.77	14	31	43	2	85%	1
3LW5_CLA_A_1138	14%	7%	0.201	0.841	2.17	2.54	14	25	38	2	100%	1
3LW5_CLA_A_1101	14%	4%	0.16	0.826	2.39	3.06	14	26	15	1	77%	1
3LW5_CLA_B_1228	14%	5%	0.157	0.819	2.36	2.98	13	29	22	1	77%	1
3LW5_CLA_R_1150	12%	7%	0.14	0.726	2.26	2.6	13	28	5	2	100%	1
3LW5_CLA_B_1236	12%	4%	0.181	0.859	2.47	2.94	15	26	25	1	72%	1
3LW5_CLA_A_1103	12%	7%	0.197	0.819	2.12	2.67	14	28	20	2	100%	1
3LW5_CLA_B_1234	12%	6%	0.188	0.821	2.21	2.89	15	20	12	2	92%	1
3LW5_CLA_1_1005	12%	4%	0.14	0.786	2.78	2.85	14	22	8	1	71%	1
3LW5_CLA_3_3011	11%	8%	0.149	0.731	2.15	2.51	16	23	21	2	100%	1
3LW5_CLA_L_1502	11%	4%	0.161	0.816	2.5	3.18	13	24	28	1	72%	1
3LW5_CLA_A_1115	11%	7%	0.161	0.75	2.22	2.65	17	23	86	2	100%	1
3LW5_CLA_4_4012	11%	2%	0.154	0.841	2.79	3.45	12	25	6	1	55%	1
3LW5_CLA_1_1008	11%	3%	0.131	0.748	2.51	3.36	14	25	12	2	78%	1
3LW5_CLA_1_1014	11%	6%	0.144	0.731	2.32	2.65	17	23	32	2	94%	1
3LW5_CLA_B_1208	11%	5%	0.171	0.801	2.61	2.76	13	28	9	2	83%	1
3LW5_CLA_1_1007	11%	7%	0.146	0.732	2.25	2.59	15	28	25	2	94%	1
3LW5_CLA_1_1012	11%	3%	0.137	0.807	2.79	3.11	11	21	2	1	55%	1
3LW5_CLA_A_1109	11%	6%	0.181	0.775	2.14	2.81	13	29	18	2	100%	1
3LW5_CLA_2_2012	10%	5%	0.158	0.789	2.4	2.89	14	25	17	1	77%	1
3LW5_CLA_B_1211	10%	8%	0.182	0.775	2.18	2.51	13	26	19	2	100%	1
3LW5_CLA_B_1209	10%	6%	0.17	0.791	2.3	2.7	16	25	17	2	85%	1
3LW5_CLA_R_1144	10%	5%	0.14	0.733	2.33	2.81	13	28	17	2	88%	1
3LW5_CLA_A_1135	10%	5%	0.178	0.817	2.45	2.75	17	23	30	1	78%	1
3LW5_CLA_2_2006	10%	7%	0.149	0.716	2.17	2.69	13	22	13	2	100%	1
3LW5_CLA_H_1145	10%	6%	0.143	0.704	2.14	2.86	16	26	50	3	100%	1
3LW5_CLA_L_1130	10%	7%	0.182	0.768	2.22	2.56	15	26	26	2	100%	1
3LW5_CLA_A_1117	10%	7%	0.203	0.8	2.17	2.58	15	27	33	2	100%	1
3LW5_CLA_A_1119	10%	7%	0.178	0.757	2.19	2.62	15	24	47	2	100%	1
3LW5_CLA_3_3017	10%	3%	0.119	0.712	2.51	3.24	17	29	10	1	77%	1
3LW5_CLA_A_1102	9%	5%	0.181	0.795	2.38	2.81	15	27	23	2	85%	1
3LW5_CLA_B_1223	9%	8%	0.193	0.778	2.18	2.45	15	25	41	2	100%	1
3LW5_CLA_1_1003	9%	4%	0.147	0.764	2.5	3.17	12	26	4	1	72%	1
3LW5_CLA_A_1123	9%	8%	0.207	0.795	2.1	2.45	15	24	34	2	100%	1
3LW5_CLA_J_1311	8%	6%	0.143	0.696	2.24	2.72	15	25	30	2	94%	1
3LW5_CLA_A_1149	8%	2%	0.139	0.741	2.78	3.76	16	34	14	3	71%	1
3LW5_CLA_B_1230	8%	4%	0.194	0.818	2.5	2.93	18	24	22	1	77%	1
3LW5_CLA_K_1146	8%	4%	0.14	0.727	2.65	3	21	27	13	1	77%	1
3LW5_CLA_2_2010	8%	6%	0.142	0.82	2.36	2.74	7	17	0	1	38%	1
3LW5_CLA_4_4011	8%	5%	0.155	0.838	2.49	2.88	8	19	2	1	38%	1
3LW5_CLA_1_1011	8%	2%	0.135	0.764	3.12	3.82	19	26	5	1	55%	1
3LW5_CLA_B_1231	8%	4%	0.163	0.778	2.62	2.96	16	21	15	1	69%	1
3LW5_CLA_3_3013	8%	5%	0.158	0.695	2.29	2.94	20	25	25	2	100%	1
3LW5_CLA_H_1207	7%	6%	0.193	0.744	2.23	2.79	15	26	26	2	100%	1
3LW5_CLA_F_1240	7%	3%	0.174	0.816	2.79	3.09	15	26	0	1	55%	1
3LW5_CLA_1_1303	7%	3%	0.148	0.717	2.71	3.15	24	29	11	3	78%	1
3LW5_CLA_3_3001	7%	5%	0.123	0.768	2.44	2.87	9	20	0	1	38%	1
3LW5_CLA_A_1113	7%	5%	0.164	0.744	2.51	2.76	13	26	16	1	77%	1
3LW5_CLA_B_1201	7%	4%	0.191	0.806	2.61	3.06	17	21	12	1	69%	1
3LW5_CLA_4_1009	6%	2%	0.168	0.798	3.01	3.46	14	21	2	1	55%	1
3LW5_CLA_K_3009	6%	7%	0.164	0.679	2.2	2.55	13	28	4	2	100%	1
3LW5_CLA_B_1222	6%	6%	0.204	0.771	2.29	2.74	15	26	46	2	89%	1
3LW5_CLA_3_3008	6%	4%	0.144	0.697	2.47	3.09	18	25	28	1	77%	1
3LW5_CLA_4_1304	6%	5%	0.167	0.681	2.26	3.03	21	32	41	3	100%	1
3LW5_CLA_4_4005	6%	5%	0.148	0.793	2.39	2.92	9	18	0	1	38%	1
3LW5_CLA_K_1143	6%	5%	0.15	0.705	2.44	2.82	14	27	34	1	77%	1
3LW5_CLA_4_4013	5%	6%	0.139	0.77	2.33	2.66	8	19	11	1	38%	1
3LW5_CLA_4_4006	5%	6%	0.175	0.719	2.36	2.72	12	25	15	2	85%	1
3LW5_CLA_F_1305	5%	4%	0.155	0.691	2.62	2.8	23	27	16	4	82%	1
3LW5_CLA_A_1116	5%	4%	0.191	0.754	2.46	2.96	13	26	11	1	80%	1
3LW5_CLA_A_1108	5%	4%	0.154	0.713	2.64	3.02	16	24	6	1	69%	1
3LW5_CLA_2_2002	5%	5%	0.173	0.704	2.36	2.87	14	31	27	2	86%	1
3LW5_CLA_3_1147	5%	3%	0.154	0.708	2.88	3.2	25	34	21	1	71%	1
3LW5_CLA_A_1121	5%	3%	0.15	0.715	2.55	3.25	13	24	8	1	65%	1
3LW5_CLA_1_1002	5%	5%	0.168	0.726	2.54	2.82	14	23	10	1	72%	1
3LW5_CLA_4_4015	5%	4%	0.147	0.692	2.54	2.98	20	25	8	1	71%	1
3LW5_CLA_3_2009	5%	5%	0.157	0.672	2.44	2.74	19	27	48	2	86%	1
3LW5_CLA_2_2003	5%	5%	0.141	0.755	2.36	2.89	8	19	1	1	38%	1
3LW5_CLA_4_1306	5%	5%	0.158	0.675	2.31	2.83	13	26	25	2	85%	1
3LW5_CLA_A_1111	5%	6%	0.202	0.752	2.29	2.78	15	26	20	1	83%	1
3LW5_CLA_4_1004	5%	5%	0.168	0.689	2.45	2.89	18	29	39	2	85%	1
3LW5_CLA_2_2011	4%	5%	0.159	0.773	2.36	2.81	8	18	1	1	38%	1
3LW5_CLA_B_1232	4%	4%	0.146	0.674	2.59	3.04	13	22	18	1	69%	1
3LW5_CLA_A_1134	4%	4%	0.168	0.706	2.54	3.09	15	22	22	1	69%	1
3LW5_CLA_B_1218	4%	4%	0.188	0.735	2.48	3.11	15	19	19	1	71%	1
3LW5_CLA_L_1148	4%	3%	0.148	0.635	2.64	3.37	24	34	42	3	85%	1
3LW5_CLA_1_1010	4%	3%	0.158	0.683	2.79	3.38	22	28	17	1	71%	1
3LW5_CLA_2_2008	4%	5%	0.151	0.745	2.41	2.95	8	18	0	1	38%	1
3LW5_CLA_3_3002	4%	5%	0.149	0.737	2.44	2.79	8	19	0	1	38%	1
3LW5_CLA_A_1151	3%	5%	0.149	0.643	2.49	2.73	17	23	21	1	77%	1
3LW5_CLA_F_1302	3%	3%	0.168	0.707	2.68	3.09	16	24	13	1	63%	1
3LW5_CLA_2_1307	3%	5%	0.137	0.712	2.38	2.87	8	19	0	1	38%	1
3LW5_CLA_A_1105	3%	4%	0.187	0.72	2.49	2.93	12	25	26	1	71%	1
3LW5_CLA_4_4007	3%	6%	0.155	0.644	2.41	2.7	14	25	0	1	80%	1
3LW5_CLA_L_1503	3%	3%	0.197	0.722	2.6	3.22	19	24	14	2	77%	1
3LW5_CLA_2_2004	3%	5%	0.17	0.674	2.45	2.69	14	22	16	1	77%	1
3LW5_CLA_1_1013	3%	3%	0.161	0.653	2.67	3.54	20	26	20	2	78%	1
3LW5_CLA_K_1142	3%	4%	0.148	0.65	2.56	2.91	15	19	16	1	69%	1
3LW5_CLA_B_1212	3%	7%	0.18	0.646	2.21	2.53	12	25	16	2	92%	1
3LW5_CLA_3_3004	3%	4%	0.151	0.723	2.33	3.1	10	19	7	1	38%	1
3LW5_CLA_3_3003	3%	3%	0.154	0.685	2.8	3.07	12	22	8	1	55%	1
3LW5_CLA_H_1241	3%	6%	0.159	0.622	2.4	2.65	12	25	13	2	85%	1
3LW5_CLA_A_1141	3%	7%	0.163	0.587	2.17	2.63	14	26	48	2	100%	1
3LW5_CLA_3_3015	3%	5%	0.15	0.707	2.38	2.77	7	19	0	1	38%	1
3LW5_CLA_4_4010	3%	5%	0.186	0.762	2.33	2.86	8	18	2	1	38%	1
3LW5_CLA_2_2014	2%	6%	0.174	0.605	2.3	2.78	21	27	56	2	94%	1
3LW5_CLA_1_1310	2%	4%	0.148	0.69	2.37	3.08	7	19	0	1	38%	1
3LW5_CLA_G_1242	2%	5%	0.159	0.614	2.48	2.92	14	27	13	1	78%	1
3LW5_CLA_1_1001	2%	2%	0.158	0.63	2.73	3.56	20	31	18	1	71%	1
3LW5_CLA_4_4001	2%	5%	0.189	0.659	2.51	2.78	14	23	5	1	77%	1
3LW5_CLA_3_3010	2%	5%	0.166	0.708	2.33	2.81	9	18	5	1	38%	1
3LW5_CLA_2_2007	2%	7%	0.179	0.583	2.15	2.58	12	28	18	2	100%	1
3LW5_CLA_3_3016	2%	7%	0.178	0.574	2.18	2.57	15	24	26	2	100%	1
3LW5_CLA_4_4004	2%	5%	0.181	0.722	2.39	2.87	7	17	2	1	38%	1
3LW5_CLA_3_3006	2%	5%	0.16	0.686	2.36	2.92	9	17	9	1	38%	1
3LW5_CLA_2_2001	2%	5%	0.185	0.633	2.43	2.81	16	25	26	1	78%	1
3LW5_CLA_B_1301	2%	2%	0.163	0.646	2.9	3.36	13	29	7	1	55%	1
3LW5_CLA_H_1505	2%	5%	0.168	0.585	2.36	2.89	13	27	6	2	85%	1
3LW5_CLA_2_2013	2%	4%	0.222	0.691	2.51	2.97	12	25	9	1	77%	1
3LW5_CLA_3_1118	2%	3%	0.175	0.651	2.81	3.36	13	23	0	1	55%	1
3LW5_CLA_4_4014	2%	3%	0.168	0.598	2.5	3.3	15	26	12	1	72%	1
3LW5_CLA_3_3007	1%	4%	0.168	0.597	2.5	3.14	12	26	2	1	65%	1
3LW5_CLA_B_1213	1%	5%	0.215	0.658	2.5	2.89	13	26	26	1	71%	1
3LW5_CLA_B_1233	1%	4%	0.178	0.577	2.49	2.98	12	26	7	1	78%	1
3LW5_CLA_A_1112	1%	4%	0.212	0.646	2.56	2.92	13	26	32	1	69%	1
3LW5_CLA_4_4003	1%	6%	0.183	0.555	2.38	2.66	16	24	6	2	85%	1
3LW5_CLA_2_2005	1%	5%	0.18	0.653	2.35	2.92	8	18	0	1	38%	1
3LW5_CLA_1_1006	1%	3%	0.162	0.58	2.92	3.24	13	23	15	1	55%	1
3LW5_CLA_L_1504	1%	6%	0.206	0.572	2.38	2.73	13	30	21	2	85%	1
3LW5_CLA_3_3014	1%	4%	0.183	0.593	2.43	3.01	9	19	0	1	38%	1
3LW5_CLA_A_1309	0%	6%	0.159	0.495	2.33	2.78	8	18	0	1	38%	1
3LW5_CLA_3_3005	0%	5%	0.208	0.575	2.35	2.9	8	17	9	1	38%	1
3LW5_CLA_1_1015	0%	5%	0.22	0.555	2.41	2.82	8	18	3	1	38%	1
3LW5_CLA_3_3012	0%	5%	0.212	0.506	2.37	2.98	9	18	11	1	38%	1
7DKZ_CLA_B_828	80%	32%	0.071	0.971	1.23	1.44	8	13	2	1	100%	1
2O01_CLA_B_1209	80%	5%	0.056	0.981	2.35	2.8	16	26	50	2	85%	1
4XK8_CLA_b_803	78%	9%	0.072	0.963	2.05	2.47	20	30	8	1	100%	1
5L8R_CLA_A_839	77%	26%	0.078	0.969	1.35	1.64	6	12	7	1	100%	1
4Y28_CLA_B_1235	67%	7%	0.094	0.955	2.36	2.53	21	24	10	1	100%	1
7M76_CLA_B_3041	100%	33%	0.015	0.999	1.25	1.37	7	8	4	1	100%	1
8OW6_CLA_B_601	100%	41%	0.016	0.998	1.2	1.02	12	4	0	1	100%	1
6PGK_CLA_G_842	99%	9%	0.024	0.997	2.21	2.22	21	25	9	1	100%	1
1VF5_CLA_B_201	97%	14%	0.039	0.993	1.61	2.22	9	17	9	3	100%	1
5V2C_CLA_d_403	97%	15%	0.034	0.984	1.7	2.01	14	23	4	1	100%	1

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

3LW5 | pdb_00003lw5

CLA: CHLOROPHYLL A

CLA is a Ligand Of Interest in 3LW5 designated by the RCSB