GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3KKQ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3KKQ_GDP_A_179 | 98% | 34% | 0.053 | 0.984 | 1.11 | 1.39 | 3 | 4 | 0 | 0 | 100% | 1 |
| 1X1R_GDP_A_1179 | 99% | 47% | 0.041 | 0.988 | 0.82 | 1.11 | 1 | 5 | 0 | 0 | 100% | 1 |
| 9C1A_GDP_A_202 | 99% | 25% | 0.042 | 0.984 | 1.15 | 1.78 | 3 | 9 | 0 | 0 | 100% | 1 |
| 9O0P_GDP_A_201 | 99% | 27% | 0.046 | 0.985 | 1.43 | 1.4 | 3 | 6 | 0 | 0 | 100% | 1 |
| 9MEZ_GDP_E_201 | 90% | 72% | 0.063 | 0.95 | 0.5 | 0.46 | - | - | 1 | 0 | 100% | 1 |
| 9C1B_GDP_A_302 | 88% | 26% | 0.076 | 0.957 | 1.15 | 1.74 | 3 | 6 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
