UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3CKO designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3CKO_UDP_A_331 | 36% | 32% | 0.163 | 0.888 | 0.92 | 1.67 | - | 4 | 0 | 0 | 84% | 1 |
| 3CKN_UDP_A_332 | 65% | 38% | 0.106 | 0.907 | 0.89 | 1.41 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3CKV_UDP_A_331 | 20% | 31% | 0.272 | 0.914 | 0.99 | 1.63 | 1 | 4 | 0 | 0 | 84% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.3 | 2.73 | 13 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_B_704 | 100% | 57% | 0.03 | 0.994 | 0.59 | 0.91 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 40% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 3H4T_UDP_A_604 | 99% | 40% | 0.039 | 0.99 | 1.01 | 1.22 | 2 | 3 | 0 | 0 | 100% | 1 |
