NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 2YME designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2YME_NAG_E_1209 | 23% | 14% | 0.13 | 0.755 | 1.23 | 2.47 | 1 | 6 | 0 | 0 | 100% | 1 |
| 2YME_NAG_I_1206 | 21% | 31% | 0.129 | 0.736 | 1.06 | 1.55 | 1 | 3 | 0 | 0 | 100% | 1 |
| 2YME_NAG_H_1206 | 9% | 75% | 0.143 | 0.638 | 0.3 | 0.56 | - | - | 0 | 0 | 100% | 1 |
| 2YME_NAG_B_1206 | 4% | 46% | 0.167 | 0.542 | 0.68 | 1.3 | - | 3 | 0 | 1 | 100% | 1 |
| 2YME_NAG_D_1208 | 3% | 25% | 0.17 | 0.524 | 0.68 | 2.24 | - | 5 | 2 | 1 | 100% | 1 |
| 2YME_NAG_J_1206 | 3% | 36% | 0.148 | 0.498 | 0.51 | 1.86 | - | 4 | 4 | 1 | 100% | 1 |
| 2YME_NAG_F_1206 | 3% | 28% | 0.157 | 0.501 | 0.91 | 1.86 | 1 | 5 | 1 | 1 | 100% | 1 |
| 2YME_NAG_C_1206 | 2% | 52% | 0.167 | 0.485 | 0.38 | 1.33 | - | 1 | 0 | 1 | 100% | 1 |
| 2YME_NAG_A_1206 | 2% | 27% | 0.156 | 0.457 | 0.9 | 1.89 | - | 6 | 0 | 1 | 100% | 1 |
| 2XZ5_NAG_D_1217 | 89% | 12% | 0.058 | 0.955 | 1.63 | 2.36 | 2 | 6 | 2 | 0 | 93% | 1 |
| 2WNL_NAG_H_400 | 81% | 58% | 0.081 | 0.935 | 0.43 | 1.03 | - | - | 0 | 0 | 100% | 1 |
| 5OAJ_NAG_E_603 | 69% | 75% | 0.093 | 0.921 | 0.3 | 0.56 | - | - | 7 | 0 | 93% | 1 |
| 5OBH_NAG_D_602 | 66% | 45% | 0.08 | 0.884 | 0.58 | 1.4 | - | 2 | 0 | 0 | 100% | 1 |
| 2BYN_NAG_E_301 | 45% | 42% | 0.065 | 0.788 | 0.54 | 1.55 | - | 3 | 0 | 0 | 100% | 1 |
| 2QFR_NAG_B_451 | 100% | 64% | 0.013 | 0.998 | 0.49 | 0.72 | - | 1 | 0 | 0 | 100% | 1 |
| 5LDS_NAG_C_1003 | 100% | 66% | 0.016 | 0.997 | 0.54 | 0.62 | - | - | 3 | 0 | 100% | 1 |
| 7DDF_NAG_B_401 | 100% | 84% | 0.016 | 0.996 | 0.21 | 0.49 | - | - | 0 | 0 | 100% | 1 |
| 2HQM_NAG_A_1301 | 100% | 62% | 0.018 | 0.996 | 0.59 | 0.7 | - | - | 0 | 0 | 100% | 1 |
| 3THD_NAG_C_704 | 100% | 59% | 0.019 | 0.994 | 0.45 | 0.96 | - | - | 0 | 0 | 100% | 1 |
