DUP: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE
DUP is a Ligand Of Interest in 2XY3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2XY3_DUP_F_1129 | 84% | 7% | 0.11 | 0.973 | 2.6 | 2.42 | 8 | 13 | 2 | 0 | 100% | 1 |
| 2XY3_DUP_E_1130 | 83% | 6% | 0.126 | 0.985 | 2.54 | 2.6 | 9 | 12 | 0 | 0 | 100% | 1 |
| 2XY3_DUP_C_1129 | 82% | 7% | 0.124 | 0.98 | 2.42 | 2.56 | 10 | 15 | 1 | 0 | 100% | 1 |
| 2XY3_DUP_A_1130 | 76% | 10% | 0.108 | 0.946 | 2.18 | 2.37 | 7 | 13 | 0 | 0 | 100% | 1 |
| 2XY3_DUP_D_1130 | 72% | 5% | 0.122 | 0.946 | 2.38 | 3.02 | 8 | 11 | 4 | 0 | 100% | 1 |
| 2XY3_DUP_B_1129 | 53% | 8% | 0.141 | 0.903 | 2.49 | 2.36 | 9 | 10 | 0 | 0 | 100% | 1 |
| 3LOJ_DUP_A_201 | 100% | 19% | 0.029 | 0.995 | 2.23 | 1.42 | 9 | 4 | 2 | 0 | 100% | 1 |
| 3HZA_DUP_A_201 | 100% | 22% | 0.036 | 0.995 | 2.01 | 1.4 | 6 | 8 | 1 | 0 | 100% | 1 |
| 5ECT_DUP_A_201 | 100% | 27% | 0.04 | 0.994 | 1.82 | 1.3 | 7 | 4 | 1 | 0 | 100% | 1 |
| 3EHW_DUP_C_777 | 100% | 27% | 0.039 | 0.991 | 1.72 | 1.37 | 4 | 4 | 4 | 0 | 100% | 1 |
| 1SIX_DUP_A_170 | 100% | 18% | 0.046 | 0.995 | 2.25 | 1.49 | 7 | 4 | 0 | 0 | 100% | 1 |
