UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 2VL8 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2VL8_UDP_A_1543 73% 30% 0.109 0.9380.96 1.72 1 700100%1
2VL8_UDP_C_1543 69% 30% 0.111 0.9290.86 1.8 1 700100%1
2VL8_UDP_B_1543 63% 27% 0.123 0.9181.09 1.74 2 600100%1
5F87_UDP_A_501 100% 29% 0.013 0.9991.18 1.54 2 420100%1
5V0T_UDP_B_501 100% 69% 0.014 0.9990.43 0.61 - 100100%1
7FGA_UDP_D_401 100% 2% 0.014 0.9993.6 2.79 15 1220100%1
8X3Q_UDP_D_401 100% 3% 0.013 0.9993.5 2.77 14 1400100%1
8X3U_UDP_B_401 100% 3% 0.012 0.9993.51 2.73 14 1220100%1