UPG: URIDINE-5'-DIPHOSPHATE-GLUCOSE
UPG is a Ligand Of Interest in 2VKD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2VKD_UPG_A_1544 | 69% | 44% | 0.147 | 0.964 | 0.75 | 1.43 | 1 | 6 | 0 | 0 | 100% | 1 |
2VKD_UPG_C_1544 | 66% | 44% | 0.15 | 0.956 | 0.74 | 1.44 | 1 | 6 | 0 | 0 | 100% | 1 |
2VKD_UPG_B_1544 | 64% | 48% | 0.159 | 0.958 | 0.8 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
2Q3E_UPG_C_501 | 99% | 42% | 0.057 | 0.987 | 0.93 | 1.37 | - | 6 | 2 | 0 | 100% | 1 |
3JSZ_UPG_A_526 | 98% | 59% | 0.057 | 0.982 | 0.8 | 0.75 | - | - | 0 | 0 | 100% | 1 |
6K0I_UPG_A_402 | 98% | 29% | 0.057 | 0.98 | 1.31 | 1.63 | 5 | 11 | 2 | 0 | 100% | 1 |
1EK6_UPG_A_401 | 98% | 48% | 0.061 | 0.982 | 0.89 | 1.12 | - | 3 | 1 | 0 | 100% | 1 |
1I24_UPG_A_402 | 98% | 49% | 0.061 | 0.982 | 0.87 | 1.11 | 1 | 4 | 1 | 0 | 100% | 0.9833 |