VDX: 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL
VDX is a Ligand Of Interest in 2HC4 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2HC4_VDX_A_525 | 32% | 5% | 0.255 | 0.931 | 3.16 | 2.41 | 16 | 13 | 1 | 0 | 100% | 1 |
| 6XZK_VDX_A_501 | 81% | 6% | 0.097 | 0.949 | 2.89 | 2.26 | 11 | 12 | 0 | 0 | 100% | 1 |
| 6XZJ_VDX_A_501 | 80% | 6% | 0.113 | 0.962 | 2.9 | 2.45 | 11 | 14 | 1 | 0 | 100% | 1 |
| 4RUJ_VDX_A_501 | 65% | 47% | 0.139 | 0.942 | 0.73 | 1.31 | 1 | 4 | 3 | 0 | 100% | 1 |
| 6XZH_VDX_A_4001 | 52% | 5% | 0.205 | 0.965 | 2.63 | 2.77 | 10 | 14 | 2 | 0 | 100% | 1 |
| 6XZV_VDX_A_501 | 37% | 7% | 0.253 | 0.954 | 2.91 | 2.21 | 11 | 11 | 2 | 0 | 100% | 1 |
| 7QPP_VDX_A_501 | 91% | 10% | 0.08 | 0.966 | 2.17 | 2.27 | 9 | 14 | 0 | 0 | 100% | 1 |
| 1IE9_VDX_A_500 | 90% | 29% | 0.073 | 0.955 | 1.2 | 1.75 | 2 | 12 | 0 | 1 | 100% | 1 |
| 3VT7_VDX_A_500 | 84% | 18% | 0.103 | 0.966 | 2.01 | 1.67 | 10 | 10 | 0 | 0 | 100% | 1 |
| 1RK3_VDX_A_500 | 80% | 5% | 0.106 | 0.956 | 3.21 | 2.29 | 18 | 16 | 1 | 0 | 100% | 1 |
