NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NAP is a Ligand Of Interest in 2GRA designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2GRA_NAP_A_1300 | 5% | 0% | 0.395 | 0.798 | 5.33 | 4.16 | 25 | 31 | 5 | 1 | 100% | 1 |
2GRA_NAP_B_2300 | 3% | 1% | 0.44 | 0.762 | 4.95 | 3.16 | 25 | 23 | 10 | 0 | 100% | 1 |
2GRA_NAP_E_5300 | 2% | 1% | 0.497 | 0.736 | 4.75 | 3.29 | 23 | 22 | 8 | 1 | 100% | 1 |
2GRA_NAP_D_4300 | 1% | 1% | 0.5 | 0.73 | 4.79 | 3.15 | 24 | 23 | 6 | 0 | 100% | 1 |
2GRA_NAP_C_3300 | 1% | 1% | 0.489 | 0.684 | 4.88 | 3.64 | 24 | 22 | 6 | 1 | 100% | 1 |
2X9G_NAP_B_1269 | 100% | 46% | 0.031 | 0.997 | 0.96 | 1.14 | 1 | 5 | 0 | 0 | 100% | 1 |
2J8T_NAP_A_1316 | 100% | 49% | 0.033 | 0.996 | 0.97 | 1.01 | 3 | 2 | 1 | 0 | 100% | 1 |
3LQL_NAP_A_500 | 100% | 44% | 0.035 | 0.996 | 1.13 | 1.07 | 3 | 4 | 1 | 0 | 100% | 1 |
3LD5_NAP_A_500 | 100% | 33% | 0.033 | 0.993 | 1.34 | 1.4 | 7 | 6 | 2 | 0 | 100% | 1 |
3M4H_NAP_A_500 | 100% | 45% | 0.037 | 0.997 | 1.12 | 1.04 | 5 | 3 | 1 | 0 | 100% | 1 |