TDK: 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-{(1S)-1-HYDROXY-1-[(R)-HYDROXY(METHOXY)PHOSPHORYL]ETHYL}-5-(2-{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM
TDK is a Ligand Of Interest in 2G28 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2G28_TDK_B_887 | 72% | 27% | 0.102 | 0.929 | 1.56 | 1.32 | 4 | 5 | 4 | 0 | 100% | 1 |
| 2G28_TDK_A_887 | 72% | 26% | 0.103 | 0.93 | 1.56 | 1.37 | 5 | 5 | 6 | 0 | 100% | 1 |
| 2G25_TDK_A_887 | 96% | 24% | 0.053 | 0.973 | 1.64 | 1.39 | 6 | 5 | 3 | 0 | 100% | 1 |
| 2QTC_TDK_A_887 | 58% | 28% | 0.118 | 0.895 | 1.56 | 1.25 | 4 | 5 | 9 | 0 | 100% | 1 |
| 6OUV_TDK_A_701 | 100% | 68% | 0.025 | 0.997 | 0.28 | 0.77 | - | 3 | 2 | 0 | 100% | 0.95 |
| 8BEO_TDK_A_604 | 94% | 3% | 0.073 | 0.979 | 2.89 | 3.31 | 6 | 11 | 7 | 0 | 100% | 1 |
| 2EZ9_TDK_B_1613 | 88% | 24% | 0.078 | 0.958 | 1.34 | 1.65 | 6 | 9 | 6 | 0 | 100% | 1 |
