AMP: ADENOSINE MONOPHOSPHATE
AMP is a Ligand Of Interest in 2C38 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2C38_AMP_V_403 | 62% | 58% | 0.156 | 0.959 | 0.6 | 0.87 | - | - | 1 | 0 | 96% | 1 |
| 2C38_AMP_B_402 | 52% | 61% | 0.174 | 0.943 | 0.64 | 0.72 | - | - | 0 | 0 | 96% | 1 |
| 2C38_AMP_H_403 | 49% | 58% | 0.171 | 0.929 | 0.7 | 0.78 | - | - | 1 | 0 | 96% | 1 |
| 2C38_AMP_J_403 | 49% | 56% | 0.178 | 0.934 | 0.74 | 0.81 | - | - | 4 | 0 | 96% | 1 |
| 2C38_AMP_B_403 | 47% | 53% | 0.177 | 0.928 | 0.61 | 1.04 | - | 1 | 1 | 0 | 96% | 1 |
| 2C38_AMP_F_402 | 47% | 50% | 0.193 | 0.945 | 0.77 | 1.06 | 1 | 1 | 0 | 0 | 96% | 1 |
| 2C38_AMP_V_402 | 46% | 48% | 0.182 | 0.928 | 0.81 | 1.07 | - | 1 | 0 | 0 | 96% | 1 |
| 2C38_AMP_H_402 | 44% | 53% | 0.196 | 0.937 | 0.65 | 1 | - | 2 | 0 | 0 | 96% | 1 |
| 2C38_AMP_N_403 | 44% | 58% | 0.198 | 0.937 | 0.7 | 0.78 | - | - | 1 | 0 | 96% | 1 |
| 2C38_AMP_J_402 | 43% | 54% | 0.187 | 0.922 | 0.7 | 0.94 | - | - | 0 | 0 | 96% | 1 |
| 2C38_AMP_F_403 | 40% | 57% | 0.21 | 0.933 | 0.71 | 0.78 | - | - | 2 | 0 | 96% | 1 |
| 2C38_AMP_X_401 | 39% | 50% | 0.205 | 0.915 | 0.74 | 1.08 | - | 4 | 0 | 0 | 100% | 1 |
| 2C38_AMP_B_401 | 37% | 41% | 0.176 | 0.874 | 0.82 | 1.36 | - | 4 | 2 | 0 | 100% | 1 |
| 2C38_AMP_V_404 | 36% | 52% | 0.235 | 0.945 | 0.75 | 0.98 | - | 1 | 5 | 0 | 96% | 1 |
| 2C38_AMP_N_402 | 34% | 60% | 0.224 | 0.921 | 0.66 | 0.73 | - | - | 0 | 0 | 96% | 1 |
| 2C38_AMP_B_404 | 33% | 53% | 0.238 | 0.935 | 0.68 | 0.99 | - | 2 | 2 | 0 | 96% | 1 |
| 2C38_AMP_J_401 | 33% | 41% | 0.207 | 0.893 | 0.69 | 1.49 | - | 3 | 0 | 0 | 100% | 1 |
| 2C38_AMP_V_401 | 30% | 55% | 0.232 | 0.903 | 0.76 | 0.83 | - | 1 | 0 | 0 | 100% | 1 |
| 2C38_AMP_X_402 | 29% | 40% | 0.23 | 0.906 | 0.76 | 1.44 | - | 1 | 0 | 0 | 96% | 1 |
| 2C38_AMP_X_403 | 28% | 53% | 0.242 | 0.912 | 0.79 | 0.91 | 1 | - | 0 | 0 | 96% | 1 |
| 2C38_AMP_F_404 | 27% | 52% | 0.244 | 0.91 | 0.68 | 1.05 | - | 1 | 3 | 0 | 96% | 1 |
| 2C38_AMP_H_404 | 27% | 53% | 0.248 | 0.912 | 0.7 | 0.98 | - | 1 | 4 | 0 | 96% | 1 |
| 2C38_AMP_F_401 | 26% | 49% | 0.237 | 0.886 | 0.67 | 1.17 | - | 3 | 0 | 0 | 100% | 1 |
| 2C38_AMP_H_401 | 25% | 54% | 0.206 | 0.848 | 0.75 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 2C38_AMP_N_404 | 25% | 50% | 0.267 | 0.921 | 0.75 | 1.07 | - | 1 | 2 | 0 | 96% | 1 |
| 2C38_AMP_X_404 | 24% | 56% | 0.287 | 0.932 | 0.72 | 0.84 | - | - | 1 | 0 | 100% | 1 |
| 2C38_AMP_J_404 | 24% | 51% | 0.276 | 0.924 | 0.68 | 1.1 | - | 2 | 3 | 0 | 96% | 1 |
| 2C38_AMP_N_401 | 19% | 52% | 0.222 | 0.823 | 0.76 | 0.99 | - | 2 | 0 | 0 | 100% | 1 |
| 8YNQ_AMP_D_504 | 99% | 40% | 0.041 | 0.99 | 0.96 | 1.26 | 1 | 2 | 11 | 0 | 100% | 1 |
| 3G89_AMP_B_304 | 99% | 30% | 0.038 | 0.986 | 1.05 | 1.63 | 1 | 4 | 6 | 0 | 100% | 1 |
| 3LOQ_AMP_A_271 | 99% | 42% | 0.039 | 0.987 | 0.82 | 1.3 | - | 2 | 2 | 0 | 100% | 1 |
| 7SNB_AMP_A_303 | 99% | 52% | 0.045 | 0.993 | 0.75 | 0.98 | - | 1 | 0 | 0 | 100% | 0.78 |
| 3FWZ_AMP_B_601 | 99% | 30% | 0.037 | 0.984 | 1.15 | 1.55 | 2 | 4 | 0 | 0 | 100% | 1 |
