UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
UMP is a Ligand Of Interest in 1O25 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1O25_UMP_A_603 | 91% | 9% | 0.065 | 0.959 | 2.14 | 2.25 | 9 | 7 | 4 | 0 | 100% | 1 |
| 1O25_UMP_B_608 | 89% | 10% | 0.07 | 0.954 | 1.98 | 2.19 | 7 | 5 | 1 | 0 | 100% | 1 |
| 1O25_UMP_C_613 | 83% | 8% | 0.074 | 0.937 | 2.15 | 2.3 | 8 | 8 | 2 | 0 | 100% | 1 |
| 1O25_UMP_D_618 | 42% | 8% | 0.119 | 0.834 | 2.11 | 2.45 | 7 | 9 | 2 | 0 | 100% | 1 |
| 5IOT_UMP_B_302 | 99% | 22% | 0.043 | 0.981 | 1.4 | 1.74 | 4 | 6 | 0 | 0 | 100% | 1 |
| 4GTF_UMP_A_302 | 98% | 41% | 0.048 | 0.985 | 0.97 | 1.21 | 1 | 4 | 0 | 0 | 100% | 1 |
| 4GTA_UMP_A_302 | 98% | 26% | 0.05 | 0.985 | 1.17 | 1.7 | 2 | 4 | 0 | 0 | 100% | 0.89 |
| 5IOS_UMP_A_303 | 98% | 27% | 0.045 | 0.977 | 1.32 | 1.5 | 3 | 4 | 1 | 0 | 100% | 1 |
| 4GTB_UMP_A_302 | 97% | 40% | 0.055 | 0.983 | 0.94 | 1.28 | - | 5 | 0 | 0 | 100% | 1 |
| 4XSD_UMP_B_1001 | 100% | 5% | 0.018 | 0.998 | 3.69 | 1.69 | 9 | 6 | 4 | 0 | 100% | 1 |
| 2WE2_UMP_A_1258 | 100% | 42% | 0.019 | 0.996 | 0.83 | 1.3 | - | 4 | 0 | 0 | 100% | 1 |
| 6A2O_UMP_A_703 | 100% | 17% | 0.022 | 0.996 | 1.63 | 1.89 | 5 | 7 | 0 | 0 | 100% | 1 |
| 5IFY_UMP_A_501 | 100% | 75% | 0.023 | 0.995 | 0.47 | 0.41 | - | - | 0 | 0 | 100% | 1 |
| 3QJ7_UMP_A_600 | 100% | 28% | 0.024 | 0.995 | 0.87 | 1.89 | - | 6 | 1 | 0 | 100% | 1 |
