Ligand validation:1KDG

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 1KDG designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
1KDG_NAG_A_803	89%	47%	0.073	0.953	0.92	1.13	1	1	0	0	100%	0.9333
1KDG_NAG_B_803	79%	38%	0.118	0.965	1.08	1.39	1	3	0	0	100%	0.9333
1KDG_NAG_A_802	56%	33%	0.126	0.899	1.3	1.46	3	4	0	0	100%	0.9333
1KDG_NAG_B_804	19%	35%	0.22	0.81	0.77	1.85	-	4	1	0	100%	0.9333
1KDG_NAG_A_804	10%	43%	0.306	0.815	0.75	1.48	1	3	0	0	100%	0.9333
1NAA_NAG_A_802	82%	41%	0.086	0.94	0.76	1.58	-	3	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.