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Gelatinamin A: a figure-of-eight lasso peptide
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 1H NMR with water suppression 10 mg/mL Gelatinamin A 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III 950 2 2D 1H-1H TOCSY 10 mg/mL Gelatinamin A 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III 950 3 2D 1H-1H NOESY 10 mg/mL Gelatinamin A 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III 950 4 2D 1H-15N HSQC 10 mg/mL Gelatinamin A 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III 950 5 2D 1H-13C HSQC 10 mg/mL Gelatinamin A 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III 950 6 3D 1H-13C HSQC-TOCSY 10 mg/mL Gelatinamin A 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III 950 8 3D 1H-15N HSQC-TOCSY 10 mg/mL Gelatinamin A 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III 950 9 3D 1H-13C HSQC-NOESY 10 mg/mL Gelatinamin A 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III 950 10 3D 1H-15N HSQC-NOESY 10 mg/mL Gelatinamin A 90% H2O/10% D2O 0.1 M 7 1 atm 298 Bruker AVANCE III 950
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE III 950
NMR Refinement Method Details Software molecular dynamics MMFF94 using Avogadro CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment MestreLab (Mnova / MestReNova / MestReC) MestreLab 2 structure calculation CYANA 2.1 Guntert, Mumenthaler and Wuthrich