SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NOESY | 8.2 mM RNA (5'-R(*GP*UP*UP*AP*GP*GP*GP*UP*UP*A)-3') | 90% H2O/10% D2O | 116 mM | 6.8 | 0.1 atm | 298 | Bruker AVANCE 600 |
| 2 | 2D 1H-13C HMBC | 8.2 mM RNA (5'-R(*GP*UP*UP*AP*GP*GP*GP*UP*UP*A)-3') | 90% H2O/10% D2O | 116 mM | 6.8 | 0.1 atm | 298 | Bruker AVANCE 600 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| molecular dynamics | X-PLOR NIH | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 10 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | chemical shift assignment | TopSpin | Bruker Biospin | |
| 2 | data analysis | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
