Experiment: 9UOD

X-RAY DIFFRACTION

Serial Crystallography (SX)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
in silico model	AlphaFold

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP		278	HEPES pH 7.6, Sodium sulfate decahydrate, PEG3350

Crystal Properties
Matthews coefficient	Solvent content
2.84	56.7

Symmetry
Space Group	C 1 2 1

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	278	PIXEL	DECTRIS PILATUS 12M		2023-10-01	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SSRF BEAMLINE BL02U1	0.979183	SSRF	BL02U1

Sample delivery method
Diffraction ID	Description	Sample Delivery Method
1		fixed target

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.82	99.66	95.1	0.131	0.152	0.076	0.972	10	4.1		45448

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.82	2.2	99		0.175	0.204	0.103	0.424

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	1.82	99.66	42509	2251	93.25	0.17926	0.17738	0.188	0.21573	0.2234	RANDOM	15.402

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.56		-1.13	0.72		0.41

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_3_deg	13.436
r_long_range_B_refined	6.951
r_dihedral_angle_2_deg	6.926
r_long_range_B_other	6.841
r_dihedral_angle_1_deg	6.441
r_scangle_other	4.542
r_mcangle_it	3.335
r_mcangle_other	3.334
r_scbond_it	2.784
r_scbond_other	2.784

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_3_deg	13.436
r_long_range_B_refined	6.951
r_dihedral_angle_2_deg	6.926
r_long_range_B_other	6.841
r_dihedral_angle_1_deg	6.441
r_scangle_other	4.542
r_mcangle_it	3.335
r_mcangle_other	3.334
r_scbond_it	2.784
r_scbond_other	2.784
r_mcbond_it	1.977
r_mcbond_other	1.977
r_angle_refined_deg	1.804
r_angle_other_deg	0.586
r_chiral_restr	0.085
r_bond_refined_d	0.009
r_gen_planes_refined	0.008
r_bond_other_d	0.001
r_gen_planes_other	0.001
r_dihedral_angle_4_deg
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded