Experiment: 9U9X

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D_13C,15N SEPARATED NOESY	0.8 mM [U-99% 13C; U-99% 15N] CID domain of human SCAF8, 100 mM None sodium chloride, 1 mM [U-99% 2H] d-DTT, 20 mM [U-99% 2H] d-Tris HCl, 0.02 % None NaN3	90% H2O/10% D2O	100 mM	7.0	1 atm	298	Bruker AVANCE 800
2	3D CBCA(CO)NH	0.8 mM [U-99% 13C; U-99% 15N] CID domain of human SCAF8, 100 mM None sodium chloride, 1 mM [U-99% 2H] d-DTT, 20 mM [U-99% 2H] d-Tris HCl, 0.02 % None NaN3	90% H2O/10% D2O	100 mM	7.0	1 atm	298	Bruker AVANCE 700
3	3D HNCACB	0.8 mM [U-99% 13C; U-99% 15N] CID domain of human SCAF8, 100 mM None sodium chloride, 1 mM [U-99% 2H] d-DTT, 20 mM [U-99% 2H] d-Tris HCl, 0.02 % None NaN3	90% H2O/10% D2O	100 mM	7.0	1 atm	298	Bruker AVANCE 700
4	3D HCCH-COSY	0.8 mM [U-99% 13C; U-99% 15N] CID domain of human SCAF8, 100 mM None sodium chloride, 1 mM [U-99% 2H] d-DTT, 20 mM [U-99% 2H] d-Tris HCl, 0.02 % None NaN3	90% H2O/10% D2O	100 mM	7.0	1 atm	298	Bruker AVANCE 700
5	3D HCCH-TOCSY	0.8 mM [U-99% 13C; U-99% 15N] CID domain of human SCAF8, 100 mM None sodium chloride, 1 mM [U-99% 2H] d-DTT, 20 mM [U-99% 2H] d-Tris HCl, 0.02 % None NaN3	90% H2O/10% D2O	100 mM	7.0	1 atm	298	Bruker AVANCE 700

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	800
2	Bruker	AVANCE	700

NMR Refinement
Method	Details	Software
simulated annealing		Amber

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	400
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	KUJIRA		Kobayashi N, Kigawa T, Yokoyama S.
2	structure calculation	CYANA	2.2	Guntert, Mumenthaler and Wuthrich
3	refinement	Amber	12	Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
4	peak picking	MagRO-NMRView	1.2.38	Kobayashi N
5	geometry optimization	TALOS		Cornilescu, Delaglio and Bax
6	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9U9X | pdb_00009u9x