9RLV | pdb_00009rlv

X-RAY DIFFRACTION

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP	5.5	291	30% PEG 1500, 0.2 M NaCl, 0.1 M Na cacodylate

Crystal Properties
Matthews coefficient	Solvent content
2.23	45

Symmetry
Space Group	P 1 21 1

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 2M		2012-12-16	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	DIAMOND BEAMLINE I04-1	0.9200	Diamond	I04-1

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.49	49.3	98.8	0.044	12.6	4.2		69287

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.49	1.52	99		0.998	1.2	4.3

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	Mean Isotropic B
X-RAY DIFFRACTION	FOURIER SYNTHESIS	FREE R-VALUE	1.49	49.294	69253	3430	98.673	0.191	0.1887	0.1887	0.2284	0.2284	26.007

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.164		-0.501	0.54		0.033

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_6_deg	15.303
r_dihedral_angle_3_deg	14.061
r_lrange_it	7.011
r_dihedral_angle_2_deg	6.598
r_dihedral_angle_1_deg	6.514
r_scangle_it	4.942
r_mcangle_it	3.823
r_scbond_it	3.321
r_mcbond_it	2.578
r_angle_refined_deg	2.014

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_6_deg	15.303
r_dihedral_angle_3_deg	14.061
r_lrange_it	7.011
r_dihedral_angle_2_deg	6.598
r_dihedral_angle_1_deg	6.514
r_scangle_it	4.942
r_mcangle_it	3.823
r_scbond_it	3.321
r_mcbond_it	2.578
r_angle_refined_deg	2.014
r_nbtor_refined	0.316
r_symmetry_nbd_refined	0.238
r_nbd_refined	0.214
r_xyhbond_nbd_refined	0.159
r_chiral_restr	0.134
r_symmetry_xyhbond_nbd_refined	0.132
r_bond_refined_d	0.01
r_gen_planes_refined	0.01

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3354
Nucleic Acid Atoms
Solvent Atoms	454
Heterogen Atoms	94

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.