9R4V | pdb_00009r4v

Solution structure of N-WASP GBD in complex with EspF


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
22D 1H-13C HSQC aliphatic0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
32D 1H-13C HSQC aromatic0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
43D HNCACB0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
53D HN(COCA)CB0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
63D HNCO0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
73D iHNCO0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
83D H(CCO)NH0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
93D C(CO)NH0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
103D HBHA(CO)NH0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
113D HCCH-COSY0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
123D HCCmHm-TOCSY0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
132D (HB)CB(CGCD)HD0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
142D (HB)CB(CGCDCE)HE0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
153D 1H-15N NOESY0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
163D 1H-13C NOESY aliphatic0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
173D 1H-13C NOESY aromatic0.5 mM [U-13C; U-15N] N-WASP GBD, 0.6 mM EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
182D 1H-15N HSQC0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
192D 1H-13C HSQC aliphatic0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
202D 1H-13C HSQC aromatic0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
213D HNCACB0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
223D HN(COCA)CB0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
233D HNCO0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
243D iHNCO0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
253D H(CCO)NH0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
263D C(CO)NH0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
273D HBHA(CO)NH0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
283D HCCH-COSY0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
293D HCCmHm-TOCSY0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
302D (HB)CB(CGCD)HD0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
312D (HB)CB(CGCDCE)HE0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
323D 1H-15N NOESY0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
333D 1H-13C NOESY aliphatic0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
343D 1H-13C NOESY aromatic0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
354D HACACON0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
363D HA(CA)CON0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
373D HA(CA)NCO0.7 mM GBD, 0.5 mM [U-13C; U-15N] EspF, 20 mM sodium phosphate, 50 mM sodium chloride93% H2O/7% D2O0.1 M6.5ambient atm298Bruker AVANCE III HD 800
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III HD800
NMR Refinement
MethodDetailsSoftware
restrained molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number30
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTopSpinBruker Biospin
2processingTopSpinBruker Biospin
3data analysisCcpNmr AnalysisCCPN
4structure calculationCYANAGuntert, Mumenthaler and Wuthrich
5refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman