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Measles Virus Fusion Glycoprotein Postfusion Core (Wild-type Variant)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 9YD9 Measles Virus Fusion Glycoprotein Postfusion core (T461I variant)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 281 30mM Sodium fluoride; 30mM Sodium bromide; 30mM Sodium iodide, 100mM Imidazole/MES monohydrate (acid), 12.5% (v/v) MPD; 12.5% (v/v) PEG 1000; 12.5% (w/v) PEG 3350 (pH 6.5)
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.551 α = 90 b = 53.984 β = 92.716 c = 70.96 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2025-05-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.91969 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.95 32.91 91.6 0.15 0.17 0.08 0.926 5.9 4.4 21439
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.95 2.11 54.2 1.12 0.6 0.309
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1.95 32.91 1.35 21415 2000 77.92 0.2001 0.1948 0.1968 0.2509 0.2508 35.1
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 14.6287 f_angle_d 0.5645 f_bond_d 0.0413 f_chiral_restr 0.0364 f_plane_restr 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3653 Nucleic Acid Atoms Solvent Atoms 151 Heterogen Atoms 2
Software Software Software Name Purpose PHENIX refinement PHASER phasing XDS data reduction Aimless data scaling