9OFN | pdb_00009ofn

Enterobacter FliC filament


ELECTRON MICROSCOPY

Refinement

RMS Deviations
KeyRefinement Restraint Deviation
r_long_range_B_other31.566
r_long_range_B_refined31.565
r_scangle_other19.757
r_mcangle_it19.311
r_mcangle_other19.311
r_dihedral_angle_3_deg11.838
r_mcbond_other11.594
r_mcbond_it11.593
r_scbond_it11.042
r_scbond_other11.042
RMS Deviations
KeyRefinement Restraint Deviation
r_long_range_B_other31.566
r_long_range_B_refined31.565
r_scangle_other19.757
r_mcangle_it19.311
r_mcangle_other19.311
r_dihedral_angle_3_deg11.838
r_mcbond_other11.594
r_mcbond_it11.593
r_scbond_it11.042
r_scbond_other11.042
r_dihedral_angle_1_deg5.111
r_dihedral_angle_2_deg2.486
r_angle_refined_deg0.716
r_angle_other_deg0.303
r_chiral_restr0.035
r_bond_refined_d0.002
r_gen_planes_refined0.002
r_bond_other_d0.001
r_gen_planes_other0.001
r_dihedral_angle_4_deg
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Sample
FliC-flagellum
Specimen Preparation
Sample Aggregation StateHELICAL ARRAY
Vitrification Instrument
Cryogen NameETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction MethodHELICAL
Number of Particles47000
Reported Resolution (Å)3.6
Resolution MethodFSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry TypeHELICAL
Axial SymmetryC1
Axial Rise24.35
Angular Rotation-33
Map-Model Fitting and Refinement
Id1
Refinement Space
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
Data Acquisition
Detector TypeGATAN K3 BIOQUANTUM (6k x 4k)
Electron Dose (electrons/Å**2)60
Imaging Experiment1
Date of Experiment
Temperature (Kelvin)
Microscope ModelTFS KRIOS
Minimum Defocus (nm)500
Maximum Defocus (nm)2500
Minimum Tilt Angle (degrees)
Maximum Tilt Angle (degrees)
Nominal CS
Imaging ModeBRIGHT FIELD
Specimen Holder Model
Nominal Magnification
Calibrated Magnification
SourceFIELD EMISSION GUN
Acceleration Voltage (kV)300
Imaging Details
Image Processing
CTF Correction TypeCTF Correction DetailsNumber of Particles SelectedParticle Selection Details
PHASE FLIPPING AND AMPLITUDE CORRECTION