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T200H Carbonic Anhydrase II pH 7.8 20 atm CO2
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 6LUW
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 293.15 1.3M of Sodium Citrate, 50mM Tris-HCl pH 7.8
Crystal Properties Matthews coefficient Solvent content 2.13 42.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.659 α = 90 b = 41.668 β = 104.683 c = 72.587 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER2 S 9M 2024-06-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PAL/PLS BEAMLINE 7A (6B, 6C1) 0.97933 PAL/PLS 7A (6B, 6C1)
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.25 30 97.7 0.068 0.074 0.029 0.997 28.076 6.5 66624
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.25 1.27 92.1 0.555 0.625 0.282 0.801 2.368 4.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R-VALUE 1.251 29.321 66608 3396 97.607 0.138 0.1365 0.1442 0.1593 0.1674 11.877
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.134 0.125 0.14 -0.299
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 15.997 r_dihedral_angle_3_deg 10.715 r_lrange_it 10.363 r_lrange_other 9.636 r_dihedral_angle_2_deg 7.771 r_scangle_it 7.197 r_scangle_other 7.183 r_dihedral_angle_1_deg 7.106 r_mcangle_other 5.526 r_mcangle_it 5.517
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 15.997 r_dihedral_angle_3_deg 10.715 r_lrange_it 10.363 r_lrange_other 9.636 r_dihedral_angle_2_deg 7.771 r_scangle_it 7.197 r_scangle_other 7.183 r_dihedral_angle_1_deg 7.106 r_mcangle_other 5.526 r_mcangle_it 5.517 r_scbond_it 5.093 r_scbond_other 5.06 r_rigid_bond_restr 3.86 r_mcbond_it 3.81 r_mcbond_other 3.761 r_angle_refined_deg 1.887 r_angle_other_deg 0.693 r_symmetry_nbd_refined 0.319 r_nbd_other 0.233 r_nbd_refined 0.204 r_symmetry_nbd_other 0.194 r_nbtor_refined 0.183 r_symmetry_xyhbond_nbd_refined 0.158 r_xyhbond_nbd_refined 0.131 r_chiral_restr 0.114 r_symmetry_nbtor_other 0.086 r_bond_refined_d 0.011 r_gen_planes_refined 0.01 r_gen_planes_other 0.002 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2051 Nucleic Acid Atoms Solvent Atoms 282 Heterogen Atoms 7
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling REFMAC phasing