Experiment: 9JMU

Solution structure of DRB3 dsRBD2 (i.e. DRB3 (83-185))

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	250 uM [U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
2	2D 1H-13C HSQC	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
3	3D HNCO	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
4	3D HN(CA)CO	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
17	3D HN(CO)CA	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
18	3D HNCA	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
5	3D HN(COCA)CB	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
6	3D HNCACB	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
10	3D HNHA	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
8	3D (H)C(CO)NH TOCSY	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
9	3D H(CCO)NH TOCSY	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
7	3D HCCH-TOCSY	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
13	3D 1H-15N NOESY HSQC	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
12	3D 1H-13C NOESY HSQC	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
15	3D NCH-NOESY HSQC	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
14	3D CNH-NOESY HSQC	500 uM [U-13C; U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600
16	2D 1H-15N IPAP HSQC	300 uM [U-15N] DRB3D2	90% H2O/10% D2O	250 mM	6.8	1 atm	298	Bruker AVANCE NEO 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE NEO	600

NMR Refinement
Method	Details	Software
torsion angle dynamics		X-PLOR NIH

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin	4	Bruker Biospin
2	processing	TopSpin	4	Bruker Biospin
3	peak picking	CARA	1.9.1	Keller and Wuthrich
5	chemical shift assignment	CARA	1.9.1	Keller and Wuthrich
4	chemical shift calculation	TALOS-N		Cornilescu, Delaglio and Bax
6	data analysis	CARA	1.9.1	Keller and Wuthrich
7	structure calculation	X-PLOR NIH	3.5	Schwieters, Kuszewski, Tjandra and Clore
8	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore
9	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9JMU | pdb_00009jmu

Solution structure of DRB3 dsRBD2 (i.e. DRB3 (83-185))