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C. thermocellum UvrA (basal conformation)
Refinement RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 3.082 f_angle_d 0.366 f_chiral_restr 0.0419 f_plane_restr 0.0032 f_bond_d 0.0025
Sample C. thermocellum UvrA
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 218734 Reported Resolution (Å) 2.97 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C2
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol AB INITIO MODEL Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type GATAN K3 BIOQUANTUM (6k x 4k) Electron Dose (electrons/Å**2) 41.93
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 1000 Maximum Defocus (nm) 2000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 105000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION crYOLO 1.9.6 IMAGE ACQUISITION EPU 2.10.0.1941REL CTF CORRECTION CTFFIND 4.1.14 MODEL REFINEMENT PHENIX 1.21.2-5419 FINAL EULER ASSIGNMENT cryoSPARC 4.5 RECONSTRUCTION cryoSPARC 4.5
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 602207