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Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
Refinement RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 10.999 r_dihedral_angle_6_deg 6.317 r_lrange_it 5.954 r_lrange_other 5.954 r_dihedral_angle_2_deg 5.372 r_dihedral_angle_1_deg 4.347 r_mcangle_it 3.363 r_mcangle_other 3.363 r_scangle_it 3.009 r_scangle_other 3.009
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 10.999 r_dihedral_angle_6_deg 6.317 r_lrange_it 5.954 r_lrange_other 5.954 r_dihedral_angle_2_deg 5.372 r_dihedral_angle_1_deg 4.347 r_mcangle_it 3.363 r_mcangle_other 3.363 r_scangle_it 3.009 r_scangle_other 3.009 r_mcbond_it 1.832 r_mcbond_other 1.832 r_scbond_it 1.679 r_scbond_other 1.679 r_dihedral_angle_other_2_deg 0.693 r_angle_refined_deg 0.687 r_angle_other_deg 0.274 r_nbtor_refined 0.222 r_symmetry_nbd_other 0.197 r_ncsr_local_group_1 0.165 r_nbd_refined 0.141 r_xyhbond_nbd_refined 0.133 r_metal_ion_refined 0.12 r_symmetry_nbtor_other 0.071 r_chiral_restr_other 0.043 r_symmetry_xyhbond_nbd_other 0.033 r_chiral_restr 0.028 r_gen_planes_refined 0.003 r_bond_refined_d 0.002 r_gen_planes_other 0.001 r_bond_other_d
Sample FusB on 70S ribosomes Sample Components FusB mRNA E-site tRNA 70S ribosome
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument FEI VITROBOT MARK IV Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 15167 Reported Resolution (Å) 2.7 Resolution Method FSC 0.143 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 Refinement Space Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type TFS FALCON 4i (4k x 4k) Electron Dose (electrons/Å**2) 28.14
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model TFS KRIOS Minimum Defocus (nm) 700 Maximum Defocus (nm) 1300 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2.7 Imaging Mode BRIGHT FIELD Specimen Holder Model FEI TITAN KRIOS AUTOGRID HOLDER Nominal Magnification 165000 Calibrated Magnification Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION cryoSPARC 4.4.1 IMAGE ACQUISITION EPU CTF CORRECTION cryoSPARC 4.4.1 INITIAL EULER ASSIGNMENT cryoSPARC 4.4.1 FINAL EULER ASSIGNMENT cryoSPARC 4.4.1 CLASSIFICATION cryoSPARC 4.4.1 RECONSTRUCTION cryoSPARC 4.4.1
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details PHASE FLIPPING AND AMPLITUDE CORRECTION 859410