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Catalytic domain of Dihydrolipoamide Succinytransferase
ELECTRON MICROSCOPY
Starting Model(s)
Initial Refinement Model(s)
Type
Source
Accession Code
Details
in silico model
Other
Sample
Dihydrolipoamide Succinyltransferase
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
FEI VITROBOT MARK IV
Cryogen Name
ETHANE
Sample Vitrification Details
Wait time: 7.5 seconds
Blot time: 0.5 seconds
Blot force: 0 seconds
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
19033
Reported Resolution (Å)
2.51
Resolution Method
FSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry Type
POINT
Point Symmetry
O
Map-Model Fitting and Refinement
Id
1
Refinement Space
REAL
Refinement Protocol
OTHER
Refinement Target
Cross-correlation coefficient
Overall B Value
69.9
Fitting Procedure
Details
The final model was built to density using the UniProt sequence in ModelAngelo. Further refinement of the model to the density was performed using ISO ...
The final model was built to density using the UniProt sequence in ModelAngelo. Further refinement of the model to the density was performed using ISOLDE in ChimeraX, Coot, Phenix. Waters were built to one chain and then that chain and water network were rebuilt in ChimeraX using symmetry.