Solution structure of the Bsu Anti-TRAP trimer
SOLUTION NMR - SOLUTION SCATTERING
| NMR Experiment |
|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
|---|
| 1 | 2D 1H-13C HSQC | 8 mM [U-15N] f AT, 20 mM [U-100% 2H] TRIS, 20 mM beta-mercaptoethanol, 1 mM zinc chloride | 90% H2O/10% D2O | 20 mM | 7.5 | 1 atm | 328 | Bruker DRX 800 |
| 2 | 2D 1H-15N HSQC | 2 mM [U-15N] f AT, 20 mM [U-100% 2H] TRIS, 20 mM beta-mercaptoethanol, 1 mM zinc chloride | 90% H2O/10% D2O | 20 mM | 7.5 | 1 atm | 328 | Bruker DRX 800 |
| 3 | 2D 1H-15N TROSY-HSQC | 2 mM [U-15N] f AT, 20 mM [U-100% 2H] TRIS, 20 mM beta-mercaptoethanol, 1 mM zinc chloride | 90% H2O/10% D2O | 20 mM | 7.5 | 1 atm | 328 | Bruker DRX 800 |
| 4 | 3D 1H-13C NOESY | 8 mM [U-15N] f AT, 20 mM [U-100% 2H] TRIS, 20 mM beta-mercaptoethanol, 1 mM zinc chloride | 90% H2O/10% D2O | 20 mM | 7.5 | 1 atm | 328 | Bruker DRX 800 |
| 5 | 3D 1H-15N NOESY | 2 mM [U-15N] f AT, 20 mM [U-100% 2H] TRIS, 20 mM beta-mercaptoethanol, 1 mM zinc chloride | 90% H2O/10% D2O | 20 mM | 7.5 | 1 atm | 328 | Bruker DRX 800 |
| NMR Spectrometer Information |
|---|
| Spectrometer | Manufacturer | Model | Field Strength |
|---|
| 1 | Bruker | DRX | 800 |
| 2 | Bruker | DRX | 600 |
| 3 | Bruker | AVANCE | 800 |
| 4 | Bruker | AVANCE | 600 |
| NMR Refinement |
|---|
| Method | Details | Software |
|---|
| simulated annealing | | X-PLOR NIH |
| NMR Ensemble Information |
|---|
| Conformer Selection Criteria | structures with the lowest energy |
|---|
| Conformers Calculated Total Number | 100 |
|---|
| Conformers Submitted Total Number | 20 |
|---|
| Representative Model | 1 (lowest energy) |
|---|
| Computation: NMR Software |
|---|
| # | Classification | Version | Software Name | Author |
|---|
| 1 | chemical shift assignment | NMRViewJ | | Bruce Johnson |
| 2 | structure calculation | X-PLOR NIH | | Schwieters, Kuszewski, Tjandra and Clore |
| 4 | peak picking | NMRView | | Johnson, One Moon Scientific |
| 5 | processing | NMRPipe | | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |