X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP8.12930.2 M lithium sulfate, 0.1 M tris pH 8.1 and 35% polyethylene glycol 400
Crystal Properties
Matthews coefficientSolvent content
2.3447.44

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 133.52α = 90
b = 57.517β = 98.39
c = 149.141γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 6M2020-11-22MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 5.0.20.9823ALS5.0.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.85461000.1030.1190.0580.9847.7453000
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.852.91000.3250.3790.1910.8913.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.8545.449956264499.080.178960.176680.22159RANDOM50.854
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.3-0.17-1.011.31
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg17.31
r_long_range_B_refined11.094
r_long_range_B_other11.094
r_dihedral_angle_2_deg8.036
r_scangle_other6.941
r_dihedral_angle_1_deg6.526
r_mcangle_it5.859
r_mcangle_other5.859
r_scbond_it4.325
r_scbond_other4.3
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg17.31
r_long_range_B_refined11.094
r_long_range_B_other11.094
r_dihedral_angle_2_deg8.036
r_scangle_other6.941
r_dihedral_angle_1_deg6.526
r_mcangle_it5.859
r_mcangle_other5.859
r_scbond_it4.325
r_scbond_other4.3
r_mcbond_it3.706
r_mcbond_other3.706
r_angle_refined_deg1.238
r_angle_other_deg0.413
r_chiral_restr0.059
r_bond_refined_d0.006
r_gen_planes_refined0.006
r_bond_other_d0.001
r_gen_planes_other0.001
r_dihedral_angle_4_deg
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms16780
Nucleic Acid Atoms
Solvent Atoms56
Heterogen Atoms59

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data scaling
HKL-2000data reduction
PHASERphasing