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CryoEM structure of M. smegmatis GMP reductase apoform at pH 6.6, extended conformation II.
ELECTRON MICROSCOPY
Refinement
RMS Deviations
Key
Refinement Restraint Deviation
f_dihedral_angle_d
3.2828
f_angle_d
0.6408
f_chiral_restr
0.0437
f_bond_d
0.0038
f_plane_restr
0.0038
Sample
Msm GMPR apoform at pH 6.6
Specimen Preparation
Sample Aggregation State
PARTICLE
Vitrification Instrument
Cryogen Name
ETHANE
Sample Vitrification Details
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
18832
Reported Resolution (Å)
3.7
Resolution Method
FSC 0.143 CUT-OFF
Other Details
Refinement Type
Symmetry Type
POINT
Map-Model Fitting and Refinement
Id
1
Refinement Space
REAL
Refinement Protocol
Refinement Target
Overall B Value
Fitting Procedure
Details
The initial structure was obtained by rigid-body fitting an appropriate model into the cryo-EM map using ChimeraX. Phenix.real_space_refine with tight ...
The initial structure was obtained by rigid-body fitting an appropriate model into the cryo-EM map using ChimeraX. Phenix.real_space_refine with tight reference model restraints to the starting model was then used to remove the worst clashes.